Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RTCBQ9Y3I0 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
RTCBQ9Y3I0 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RTCBQ9Y3I0 LY6E-205ENST00000519611 635 ntTSL 3 BASIC26.36■■□□□ 1.81
RTCBQ9Y3I0 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC26.36■■□□□ 1.81
RTCBQ9Y3I0 TK2-204ENST00000525974 1178 ntTSL 2 BASIC26.36■■□□□ 1.81
RTCBQ9Y3I0 AC124016.1-201ENST00000609552 612 ntBASIC26.36■■□□□ 1.81
RTCBQ9Y3I0 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RTCBQ9Y3I0 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RTCBQ9Y3I0 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RTCBQ9Y3I0 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RTCBQ9Y3I0 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RTCBQ9Y3I0 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RTCBQ9Y3I0 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC26.36■■□□□ 1.81
RTCBQ9Y3I0 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
RTCBQ9Y3I0 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
RTCBQ9Y3I0 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC26.35■■□□□ 1.81
RTCBQ9Y3I0 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
RTCBQ9Y3I0 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
RTCBQ9Y3I0 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
RTCBQ9Y3I0 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
RTCBQ9Y3I0 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
RTCBQ9Y3I0 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
RTCBQ9Y3I0 MAX-217ENST00000557277 728 ntTSL 3 BASIC26.35■■□□□ 1.81
RTCBQ9Y3I0 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC26.35■■□□□ 1.81
RTCBQ9Y3I0 AL023875.1-201ENST00000640777 796 ntBASIC26.35■■□□□ 1.81
RTCBQ9Y3I0 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC26.35■■□□□ 1.81
RTCBQ9Y3I0 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
RTCBQ9Y3I0 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
RTCBQ9Y3I0 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
RTCBQ9Y3I0 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
RTCBQ9Y3I0 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC26.34■■□□□ 1.81
RTCBQ9Y3I0 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RTCBQ9Y3I0 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RTCBQ9Y3I0 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
RTCBQ9Y3I0 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RTCBQ9Y3I0 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
RTCBQ9Y3I0 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RTCBQ9Y3I0 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC26.34■■□□□ 1.81
RTCBQ9Y3I0 SERF2-207ENST00000409614 582 ntTSL 2 BASIC26.34■■□□□ 1.81
RTCBQ9Y3I0 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
RTCBQ9Y3I0 AC133681.1-201ENST00000465482 601 ntBASIC26.34■■□□□ 1.81
RTCBQ9Y3I0 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC26.34■■□□□ 1.81
RTCBQ9Y3I0 C2orf69P4-201ENST00000565394 541 ntBASIC26.34■■□□□ 1.81
RTCBQ9Y3I0 AL049637.2-201ENST00000641778 930 ntBASIC26.34■■□□□ 1.81
RTCBQ9Y3I0 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
RTCBQ9Y3I0 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
RTCBQ9Y3I0 AC068473.5-201ENST00000616428 2072 ntBASIC26.34■■□□□ 1.81
RTCBQ9Y3I0 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RTCBQ9Y3I0 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
RTCBQ9Y3I0 AC010542.4-201ENST00000563151 1910 ntBASIC26.33■■□□□ 1.81
RTCBQ9Y3I0 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC26.33■■□□□ 1.81
RTCBQ9Y3I0 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
RTCBQ9Y3I0 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
RTCBQ9Y3I0 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
RTCBQ9Y3I0 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC26.33■■□□□ 1.81
RTCBQ9Y3I0 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
RTCBQ9Y3I0 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC26.33■■□□□ 1.81
RTCBQ9Y3I0 THEM4-205ENST00000489410 643 ntTSL 2 BASIC26.33■■□□□ 1.81
RTCBQ9Y3I0 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC26.33■■□□□ 1.81
RTCBQ9Y3I0 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
RTCBQ9Y3I0 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC26.33■■□□□ 1.81
RTCBQ9Y3I0 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC26.33■■□□□ 1.81
RTCBQ9Y3I0 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
RTCBQ9Y3I0 STX5-203ENST00000394690 1568 ntTSL 5 BASIC26.33■■□□□ 1.8
RTCBQ9Y3I0 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.8
RTCBQ9Y3I0 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC26.32■■□□□ 1.8
RTCBQ9Y3I0 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
RTCBQ9Y3I0 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
RTCBQ9Y3I0 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RTCBQ9Y3I0 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC26.32■■□□□ 1.8
RTCBQ9Y3I0 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC26.32■■□□□ 1.8
RTCBQ9Y3I0 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC26.32■■□□□ 1.8
RTCBQ9Y3I0 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
RTCBQ9Y3I0 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC26.32■■□□□ 1.8
RTCBQ9Y3I0 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC26.32■■□□□ 1.8
RTCBQ9Y3I0 AP001412.1-201ENST00000608405 714 ntBASIC26.32■■□□□ 1.8
RTCBQ9Y3I0 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC26.32■■□□□ 1.8
RTCBQ9Y3I0 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC26.32■■□□□ 1.8
RTCBQ9Y3I0 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC26.32■■□□□ 1.8
RTCBQ9Y3I0 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
RTCBQ9Y3I0 PKM-204ENST00000449901 2526 ntTSL 2 BASIC26.31■■□□□ 1.8
RTCBQ9Y3I0 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC26.31■■□□□ 1.8
RTCBQ9Y3I0 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC26.31■■□□□ 1.8
RTCBQ9Y3I0 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
RTCBQ9Y3I0 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC26.31■■□□□ 1.8
RTCBQ9Y3I0 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC26.31■■□□□ 1.8
RTCBQ9Y3I0 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC26.31■■□□□ 1.8
RTCBQ9Y3I0 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC26.31■■□□□ 1.8
RTCBQ9Y3I0 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
RTCBQ9Y3I0 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC26.31■■□□□ 1.8
RTCBQ9Y3I0 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC26.31■■□□□ 1.8
RTCBQ9Y3I0 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC26.31■■□□□ 1.8
RTCBQ9Y3I0 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC26.31■■□□□ 1.8
RTCBQ9Y3I0 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC26.31■■□□□ 1.8
RTCBQ9Y3I0 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC26.31■■□□□ 1.8
RTCBQ9Y3I0 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RTCBQ9Y3I0 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RTCBQ9Y3I0 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC26.3■■□□□ 1.8
RTCBQ9Y3I0 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms