Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRCH1Q9Y2L9 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
LRCH1Q9Y2L9 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
LRCH1Q9Y2L9 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRCH1Q9Y2L9 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.67■□□□□ 0.74
LRCH1Q9Y2L9 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LRCH1Q9Y2L9 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRCH1Q9Y2L9 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
LRCH1Q9Y2L9 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
LRCH1Q9Y2L9 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRCH1Q9Y2L9 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
LRCH1Q9Y2L9 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
LRCH1Q9Y2L9 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRCH1Q9Y2L9 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.66■□□□□ 0.74
LRCH1Q9Y2L9 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRCH1Q9Y2L9 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRCH1Q9Y2L9 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LRCH1Q9Y2L9 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
LRCH1Q9Y2L9 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
LRCH1Q9Y2L9 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.66■□□□□ 0.74
LRCH1Q9Y2L9 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.66■□□□□ 0.74
LRCH1Q9Y2L9 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
LRCH1Q9Y2L9 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
LRCH1Q9Y2L9 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.66■□□□□ 0.74
LRCH1Q9Y2L9 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.66■□□□□ 0.74
LRCH1Q9Y2L9 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRCH1Q9Y2L9 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
LRCH1Q9Y2L9 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
LRCH1Q9Y2L9 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRCH1Q9Y2L9 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRCH1Q9Y2L9 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRCH1Q9Y2L9 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.65■□□□□ 0.74
LRCH1Q9Y2L9 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRCH1Q9Y2L9 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRCH1Q9Y2L9 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRCH1Q9Y2L9 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
LRCH1Q9Y2L9 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRCH1Q9Y2L9 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRCH1Q9Y2L9 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
LRCH1Q9Y2L9 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
LRCH1Q9Y2L9 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRCH1Q9Y2L9 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRCH1Q9Y2L9 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LRCH1Q9Y2L9 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LRCH1Q9Y2L9 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.65■□□□□ 0.74
LRCH1Q9Y2L9 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
LRCH1Q9Y2L9 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
LRCH1Q9Y2L9 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRCH1Q9Y2L9 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRCH1Q9Y2L9 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRCH1Q9Y2L9 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
LRCH1Q9Y2L9 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.65■□□□□ 0.74
LRCH1Q9Y2L9 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRCH1Q9Y2L9 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LRCH1Q9Y2L9 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LRCH1Q9Y2L9 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.74
LRCH1Q9Y2L9 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
LRCH1Q9Y2L9 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
LRCH1Q9Y2L9 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
LRCH1Q9Y2L9 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
LRCH1Q9Y2L9 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
LRCH1Q9Y2L9 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
LRCH1Q9Y2L9 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.64■□□□□ 0.74
LRCH1Q9Y2L9 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
LRCH1Q9Y2L9 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
LRCH1Q9Y2L9 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRCH1Q9Y2L9 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LRCH1Q9Y2L9 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.64■□□□□ 0.73
LRCH1Q9Y2L9 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.64■□□□□ 0.73
LRCH1Q9Y2L9 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.64■□□□□ 0.73
LRCH1Q9Y2L9 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.64■□□□□ 0.73
LRCH1Q9Y2L9 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
LRCH1Q9Y2L9 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
LRCH1Q9Y2L9 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
LRCH1Q9Y2L9 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRCH1Q9Y2L9 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRCH1Q9Y2L9 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.64■□□□□ 0.73
LRCH1Q9Y2L9 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRCH1Q9Y2L9 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.64■□□□□ 0.73
LRCH1Q9Y2L9 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
LRCH1Q9Y2L9 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.64■□□□□ 0.73
LRCH1Q9Y2L9 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
LRCH1Q9Y2L9 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRCH1Q9Y2L9 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRCH1Q9Y2L9 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LRCH1Q9Y2L9 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.63■□□□□ 0.73
LRCH1Q9Y2L9 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.63■□□□□ 0.73
LRCH1Q9Y2L9 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LRCH1Q9Y2L9 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.63■□□□□ 0.73
LRCH1Q9Y2L9 Z92544.1-202ENST00000571933 1220 ntBASIC19.63■□□□□ 0.73
LRCH1Q9Y2L9 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
LRCH1Q9Y2L9 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LRCH1Q9Y2L9 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
LRCH1Q9Y2L9 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LRCH1Q9Y2L9 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
LRCH1Q9Y2L9 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LRCH1Q9Y2L9 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRCH1Q9Y2L9 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.62■□□□□ 0.73
LRCH1Q9Y2L9 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRCH1Q9Y2L9 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms