Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CDH23Q9H251 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CDH23Q9H251 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CDH23Q9H251 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CDH23Q9H251 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
CDH23Q9H251 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDH23Q9H251 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CDH23Q9H251 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC22.25■■□□□ 1.15
CDH23Q9H251 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC22.25■■□□□ 1.15
CDH23Q9H251 AC120498.10-201ENST00000621827 505 ntBASIC22.25■■□□□ 1.15
CDH23Q9H251 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
CDH23Q9H251 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC22.25■■□□□ 1.15
CDH23Q9H251 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDH23Q9H251 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDH23Q9H251 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDH23Q9H251 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDH23Q9H251 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC22.25■■□□□ 1.15
CDH23Q9H251 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDH23Q9H251 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC22.25■■□□□ 1.15
CDH23Q9H251 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC22.25■■□□□ 1.15
CDH23Q9H251 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC22.25■■□□□ 1.15
CDH23Q9H251 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC22.25■■□□□ 1.15
CDH23Q9H251 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDH23Q9H251 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
CDH23Q9H251 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CDH23Q9H251 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDH23Q9H251 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CDH23Q9H251 TERF1P1-201ENST00000311003 1181 ntBASIC22.25■■□□□ 1.15
CDH23Q9H251 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CDH23Q9H251 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
CDH23Q9H251 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC22.25■■□□□ 1.15
CDH23Q9H251 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDH23Q9H251 AC026471.5-201ENST00000615068 467 ntBASIC22.25■■□□□ 1.15
CDH23Q9H251 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC22.25■■□□□ 1.15
CDH23Q9H251 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CDH23Q9H251 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC22.24■■□□□ 1.15
CDH23Q9H251 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CDH23Q9H251 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CDH23Q9H251 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC22.24■■□□□ 1.15
CDH23Q9H251 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC22.24■■□□□ 1.15
CDH23Q9H251 AC093323.1-202ENST00000635031 2045 ntBASIC22.24■■□□□ 1.15
CDH23Q9H251 NFE2L3P1-201ENST00000588207 1959 ntBASIC22.24■■□□□ 1.15
CDH23Q9H251 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
CDH23Q9H251 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CDH23Q9H251 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC22.24■■□□□ 1.15
CDH23Q9H251 HES2-205ENST00000487437 968 ntTSL 3 BASIC22.24■■□□□ 1.15
CDH23Q9H251 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CDH23Q9H251 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC22.24■■□□□ 1.15
CDH23Q9H251 ANOS2P-203ENST00000472227 1816 ntBASIC22.24■■□□□ 1.15
CDH23Q9H251 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
CDH23Q9H251 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
CDH23Q9H251 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CDH23Q9H251 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
CDH23Q9H251 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CDH23Q9H251 AC008175.2-201ENST00000612840 297 ntBASIC22.24■■□□□ 1.15
CDH23Q9H251 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CDH23Q9H251 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC22.24■■□□□ 1.15
CDH23Q9H251 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
CDH23Q9H251 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CDH23Q9H251 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC22.23■■□□□ 1.15
CDH23Q9H251 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC22.23■■□□□ 1.15
CDH23Q9H251 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC22.23■■□□□ 1.15
CDH23Q9H251 KRT8P9-201ENST00000558927 1449 ntBASIC22.23■■□□□ 1.15
CDH23Q9H251 AC087633.2-202ENST00000565166 1439 ntBASIC22.23■■□□□ 1.15
CDH23Q9H251 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CDH23Q9H251 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC22.23■■□□□ 1.15
CDH23Q9H251 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC22.22■■□□□ 1.15
CDH23Q9H251 AC005521.1-201ENST00000393351 872 ntBASIC22.22■■□□□ 1.15
CDH23Q9H251 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC22.22■■□□□ 1.15
CDH23Q9H251 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC22.22■■□□□ 1.15
CDH23Q9H251 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CDH23Q9H251 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
CDH23Q9H251 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC22.22■■□□□ 1.15
CDH23Q9H251 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CDH23Q9H251 Six3os1_6.1-201ENST00000620790 196 ntBASIC22.22■■□□□ 1.15
CDH23Q9H251 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC22.22■■□□□ 1.15
CDH23Q9H251 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CDH23Q9H251 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CDH23Q9H251 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC22.22■■□□□ 1.15
CDH23Q9H251 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC22.22■■□□□ 1.15
CDH23Q9H251 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
CDH23Q9H251 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CDH23Q9H251 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC22.21■■□□□ 1.15
CDH23Q9H251 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CDH23Q9H251 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC22.21■■□□□ 1.15
CDH23Q9H251 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
CDH23Q9H251 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CDH23Q9H251 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC22.21■■□□□ 1.15
CDH23Q9H251 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC22.21■■□□□ 1.15
CDH23Q9H251 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
CDH23Q9H251 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CDH23Q9H251 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC22.21■■□□□ 1.15
CDH23Q9H251 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC22.21■■□□□ 1.15
CDH23Q9H251 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC22.21■■□□□ 1.15
CDH23Q9H251 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CDH23Q9H251 RARRES2P10-201ENST00000564312 460 ntBASIC22.21■■□□□ 1.15
CDH23Q9H251 C11orf96-202ENST00000528572 1834 ntBASIC22.21■■□□□ 1.15
CDH23Q9H251 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC22.21■■□□□ 1.15
CDH23Q9H251 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CDH23Q9H251 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms