Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NDC1Q9BTX1 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NDC1Q9BTX1 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
NDC1Q9BTX1 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
NDC1Q9BTX1 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
NDC1Q9BTX1 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NDC1Q9BTX1 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
NDC1Q9BTX1 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NDC1Q9BTX1 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NDC1Q9BTX1 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
NDC1Q9BTX1 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NDC1Q9BTX1 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.79■□□□□ 0.76
NDC1Q9BTX1 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.79■□□□□ 0.76
NDC1Q9BTX1 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
NDC1Q9BTX1 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NDC1Q9BTX1 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.79■□□□□ 0.76
NDC1Q9BTX1 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.79■□□□□ 0.76
NDC1Q9BTX1 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
NDC1Q9BTX1 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NDC1Q9BTX1 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NDC1Q9BTX1 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NDC1Q9BTX1 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NDC1Q9BTX1 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.78■□□□□ 0.76
NDC1Q9BTX1 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.78■□□□□ 0.76
NDC1Q9BTX1 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.78■□□□□ 0.76
NDC1Q9BTX1 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
NDC1Q9BTX1 MKRN4P-201ENST00000444706 1521 ntBASIC19.78■□□□□ 0.76
NDC1Q9BTX1 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NDC1Q9BTX1 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.78■□□□□ 0.76
NDC1Q9BTX1 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NDC1Q9BTX1 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
NDC1Q9BTX1 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NDC1Q9BTX1 GUSBP6-202ENST00000438529 1198 ntBASIC19.78■□□□□ 0.76
NDC1Q9BTX1 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NDC1Q9BTX1 CDV3P1-201ENST00000471403 739 ntBASIC19.78■□□□□ 0.76
NDC1Q9BTX1 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.78■□□□□ 0.76
NDC1Q9BTX1 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NDC1Q9BTX1 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.78■□□□□ 0.76
NDC1Q9BTX1 AC016405.3-201ENST00000607710 860 ntBASIC19.78■□□□□ 0.76
NDC1Q9BTX1 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
NDC1Q9BTX1 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NDC1Q9BTX1 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.78■□□□□ 0.76
NDC1Q9BTX1 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.78■□□□□ 0.76
NDC1Q9BTX1 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
NDC1Q9BTX1 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
NDC1Q9BTX1 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.78■□□□□ 0.76
NDC1Q9BTX1 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NDC1Q9BTX1 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NDC1Q9BTX1 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NDC1Q9BTX1 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.78■□□□□ 0.76
NDC1Q9BTX1 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.78■□□□□ 0.76
NDC1Q9BTX1 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
NDC1Q9BTX1 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NDC1Q9BTX1 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NDC1Q9BTX1 AL512625.2-201ENST00000417533 625 ntBASIC19.77■□□□□ 0.76
NDC1Q9BTX1 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.77■□□□□ 0.76
NDC1Q9BTX1 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NDC1Q9BTX1 AC142086.2-201ENST00000569753 217 ntBASIC19.77■□□□□ 0.76
NDC1Q9BTX1 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.77■□□□□ 0.76
NDC1Q9BTX1 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.77■□□□□ 0.76
NDC1Q9BTX1 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.77■□□□□ 0.76
NDC1Q9BTX1 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.77■□□□□ 0.76
NDC1Q9BTX1 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
NDC1Q9BTX1 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.77■□□□□ 0.76
NDC1Q9BTX1 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NDC1Q9BTX1 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NDC1Q9BTX1 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NDC1Q9BTX1 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
NDC1Q9BTX1 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
NDC1Q9BTX1 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NDC1Q9BTX1 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
NDC1Q9BTX1 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
NDC1Q9BTX1 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NDC1Q9BTX1 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NDC1Q9BTX1 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
NDC1Q9BTX1 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.76■□□□□ 0.75
NDC1Q9BTX1 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.76■□□□□ 0.75
NDC1Q9BTX1 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.76■□□□□ 0.75
NDC1Q9BTX1 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
NDC1Q9BTX1 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NDC1Q9BTX1 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NDC1Q9BTX1 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NDC1Q9BTX1 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.76■□□□□ 0.75
NDC1Q9BTX1 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
NDC1Q9BTX1 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.75■□□□□ 0.75
NDC1Q9BTX1 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NDC1Q9BTX1 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.75■□□□□ 0.75
NDC1Q9BTX1 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NDC1Q9BTX1 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
NDC1Q9BTX1 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NDC1Q9BTX1 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NDC1Q9BTX1 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NDC1Q9BTX1 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
NDC1Q9BTX1 AC091799.1-201ENST00000422823 811 ntBASIC19.75■□□□□ 0.75
NDC1Q9BTX1 RARRES2P4-201ENST00000514074 484 ntBASIC19.75■□□□□ 0.75
NDC1Q9BTX1 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.75■□□□□ 0.75
NDC1Q9BTX1 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NDC1Q9BTX1 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
NDC1Q9BTX1 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.75■□□□□ 0.75
NDC1Q9BTX1 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms