Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CCL13Q99616 AC080038.1-201ENST00000611274 1154 ntBASIC17.37■□□□□ 0.37
CCL13Q99616 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCL13Q99616 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.37■□□□□ 0.37
CCL13Q99616 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCL13Q99616 AL137060.1-201ENST00000618151 2648 ntBASIC17.37■□□□□ 0.37
CCL13Q99616 AL049796.1-201ENST00000565336 1766 ntBASIC17.37■□□□□ 0.37
CCL13Q99616 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCL13Q99616 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC17.37■□□□□ 0.37
CCL13Q99616 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCL13Q99616 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCL13Q99616 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCL13Q99616 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC17.36■□□□□ 0.37
CCL13Q99616 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCL13Q99616 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.36■□□□□ 0.37
CCL13Q99616 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCL13Q99616 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCL13Q99616 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC17.36■□□□□ 0.37
CCL13Q99616 TERF1P5-201ENST00000477545 1207 ntBASIC17.36■□□□□ 0.37
CCL13Q99616 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC17.36■□□□□ 0.37
CCL13Q99616 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC17.36■□□□□ 0.37
CCL13Q99616 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC17.36■□□□□ 0.37
CCL13Q99616 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC17.36■□□□□ 0.37
CCL13Q99616 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCL13Q99616 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCL13Q99616 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
CCL13Q99616 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CCL13Q99616 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCL13Q99616 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CCL13Q99616 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CCL13Q99616 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCL13Q99616 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCL13Q99616 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC17.35■□□□□ 0.37
CCL13Q99616 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.35■□□□□ 0.37
CCL13Q99616 DUX4L16-201ENST00000555130 1264 ntBASIC17.35■□□□□ 0.37
CCL13Q99616 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CCL13Q99616 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCL13Q99616 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCL13Q99616 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCL13Q99616 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CCL13Q99616 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCL13Q99616 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
CCL13Q99616 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCL13Q99616 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.34■□□□□ 0.37
CCL13Q99616 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CCL13Q99616 CLDN5-201ENST00000403084 2357 ntBASIC17.34■□□□□ 0.37
CCL13Q99616 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.34■□□□□ 0.37
CCL13Q99616 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CCL13Q99616 VPS53-216ENST00000574029 585 ntTSL 4 BASIC17.34■□□□□ 0.37
CCL13Q99616 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CCL13Q99616 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCL13Q99616 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.34■□□□□ 0.37
CCL13Q99616 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCL13Q99616 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
CCL13Q99616 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCL13Q99616 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCL13Q99616 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.33■□□□□ 0.37
CCL13Q99616 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCL13Q99616 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC17.33■□□□□ 0.37
CCL13Q99616 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCL13Q99616 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCL13Q99616 UQCRFS1P1-201ENST00000435169 820 ntBASIC17.33■□□□□ 0.36
CCL13Q99616 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.33■□□□□ 0.36
CCL13Q99616 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC17.33■□□□□ 0.36
CCL13Q99616 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC17.33■□□□□ 0.36
CCL13Q99616 AC243732.1-201ENST00000612648 864 ntBASIC17.33■□□□□ 0.36
CCL13Q99616 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
CCL13Q99616 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCL13Q99616 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCL13Q99616 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCL13Q99616 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCL13Q99616 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.32■□□□□ 0.36
CCL13Q99616 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCL13Q99616 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCL13Q99616 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCL13Q99616 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCL13Q99616 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC17.32■□□□□ 0.36
CCL13Q99616 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCL13Q99616 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCL13Q99616 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC17.32■□□□□ 0.36
CCL13Q99616 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC17.32■□□□□ 0.36
CCL13Q99616 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCL13Q99616 AC013268.1-206ENST00000638368 961 ntBASIC17.32■□□□□ 0.36
CCL13Q99616 AC112229.1-201ENST00000639295 961 ntBASIC17.32■□□□□ 0.36
CCL13Q99616 AC073111.5-205ENST00000641717 521 ntBASIC17.32■□□□□ 0.36
CCL13Q99616 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC17.32■□□□□ 0.36
CCL13Q99616 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCL13Q99616 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCL13Q99616 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CCL13Q99616 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCL13Q99616 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCL13Q99616 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCL13Q99616 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.31■□□□□ 0.36
CCL13Q99616 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCL13Q99616 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CCL13Q99616 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCL13Q99616 METTL26-203ENST00000397664 604 ntTSL 2 BASIC17.31■□□□□ 0.36
CCL13Q99616 AC007322.1-201ENST00000426983 750 ntBASIC17.31■□□□□ 0.36
CCL13Q99616 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC17.31■□□□□ 0.36
CCL13Q99616 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms