Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
NECTIN4Q96NY8 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
NECTIN4Q96NY8 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NECTIN4Q96NY8 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
NECTIN4Q96NY8 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
NECTIN4Q96NY8 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
NECTIN4Q96NY8 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NECTIN4Q96NY8 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NECTIN4Q96NY8 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NECTIN4Q96NY8 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NECTIN4Q96NY8 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NECTIN4Q96NY8 MIR4785-201ENST00000585005 73 ntBASIC21.59■■□□□ 1.05
NECTIN4Q96NY8 MTDHP1-201ENST00000605323 784 ntBASIC21.59■■□□□ 1.05
NECTIN4Q96NY8 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
NECTIN4Q96NY8 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
NECTIN4Q96NY8 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NECTIN4Q96NY8 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
NECTIN4Q96NY8 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NECTIN4Q96NY8 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
NECTIN4Q96NY8 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NECTIN4Q96NY8 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
NECTIN4Q96NY8 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC21.58■■□□□ 1.05
NECTIN4Q96NY8 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NECTIN4Q96NY8 TSPY7P-201ENST00000431358 1114 ntBASIC21.58■■□□□ 1.05
NECTIN4Q96NY8 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC21.58■■□□□ 1.05
NECTIN4Q96NY8 DHDH-203ENST00000522614 776 ntTSL 5 BASIC21.58■■□□□ 1.05
NECTIN4Q96NY8 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC21.58■■□□□ 1.05
NECTIN4Q96NY8 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.05
NECTIN4Q96NY8 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC21.58■■□□□ 1.05
NECTIN4Q96NY8 AL049637.2-201ENST00000641778 930 ntBASIC21.58■■□□□ 1.05
NECTIN4Q96NY8 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
NECTIN4Q96NY8 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
NECTIN4Q96NY8 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
NECTIN4Q96NY8 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
NECTIN4Q96NY8 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.58■■□□□ 1.04
NECTIN4Q96NY8 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
NECTIN4Q96NY8 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
NECTIN4Q96NY8 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NECTIN4Q96NY8 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC21.57■■□□□ 1.04
NECTIN4Q96NY8 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
NECTIN4Q96NY8 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
NECTIN4Q96NY8 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC21.57■■□□□ 1.04
NECTIN4Q96NY8 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
NECTIN4Q96NY8 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
NECTIN4Q96NY8 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.57■■□□□ 1.04
NECTIN4Q96NY8 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC21.57■■□□□ 1.04
NECTIN4Q96NY8 KLF2-202ENST00000592003 564 ntTSL 3 BASIC21.57■■□□□ 1.04
NECTIN4Q96NY8 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
NECTIN4Q96NY8 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC21.57■■□□□ 1.04
NECTIN4Q96NY8 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
NECTIN4Q96NY8 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NECTIN4Q96NY8 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NECTIN4Q96NY8 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NECTIN4Q96NY8 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.56■■□□□ 1.04
NECTIN4Q96NY8 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NECTIN4Q96NY8 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.56■■□□□ 1.04
NECTIN4Q96NY8 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NECTIN4Q96NY8 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.56■■□□□ 1.04
NECTIN4Q96NY8 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
NECTIN4Q96NY8 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NECTIN4Q96NY8 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NECTIN4Q96NY8 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NECTIN4Q96NY8 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
NECTIN4Q96NY8 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NECTIN4Q96NY8 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC21.56■■□□□ 1.04
NECTIN4Q96NY8 AC239809.2-201ENST00000415381 517 ntBASIC21.56■■□□□ 1.04
NECTIN4Q96NY8 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC21.56■■□□□ 1.04
NECTIN4Q96NY8 LY6E-205ENST00000519611 635 ntTSL 3 BASIC21.56■■□□□ 1.04
NECTIN4Q96NY8 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC21.56■■□□□ 1.04
NECTIN4Q96NY8 AC124016.1-201ENST00000609552 612 ntBASIC21.56■■□□□ 1.04
NECTIN4Q96NY8 AC092053.2-201ENST00000640557 1818 ntBASIC21.56■■□□□ 1.04
NECTIN4Q96NY8 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NECTIN4Q96NY8 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NECTIN4Q96NY8 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.55■■□□□ 1.04
NECTIN4Q96NY8 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
NECTIN4Q96NY8 GGT1-206ENST00000404223 952 ntTSL 2 BASIC21.55■■□□□ 1.04
NECTIN4Q96NY8 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
NECTIN4Q96NY8 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC21.55■■□□□ 1.04
NECTIN4Q96NY8 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.55■■□□□ 1.04
NECTIN4Q96NY8 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NECTIN4Q96NY8 REXO2-216ENST00000544196 452 ntTSL 3 BASIC21.55■■□□□ 1.04
NECTIN4Q96NY8 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC21.55■■□□□ 1.04
NECTIN4Q96NY8 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NECTIN4Q96NY8 C2orf69P4-201ENST00000565394 541 ntBASIC21.55■■□□□ 1.04
NECTIN4Q96NY8 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NECTIN4Q96NY8 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NECTIN4Q96NY8 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NECTIN4Q96NY8 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NECTIN4Q96NY8 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NECTIN4Q96NY8 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NECTIN4Q96NY8 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NECTIN4Q96NY8 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.55■■□□□ 1.04
NECTIN4Q96NY8 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.55■■□□□ 1.04
NECTIN4Q96NY8 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NECTIN4Q96NY8 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NECTIN4Q96NY8 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NECTIN4Q96NY8 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NECTIN4Q96NY8 C11orf96-202ENST00000528572 1834 ntBASIC21.55■■□□□ 1.04
NECTIN4Q96NY8 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.54■■□□□ 1.04
NECTIN4Q96NY8 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms