Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RTP4Q96DX8 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RTP4Q96DX8 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
RTP4Q96DX8 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.17■□□□□ 0.98
RTP4Q96DX8 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.17■□□□□ 0.98
RTP4Q96DX8 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.17■□□□□ 0.98
RTP4Q96DX8 KRT18P5-201ENST00000436075 1291 ntBASIC21.17■□□□□ 0.98
RTP4Q96DX8 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RTP4Q96DX8 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.17■□□□□ 0.98
RTP4Q96DX8 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RTP4Q96DX8 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RTP4Q96DX8 DUX4L2-201ENST00000561772 1275 ntBASIC21.17■□□□□ 0.98
RTP4Q96DX8 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.17■□□□□ 0.98
RTP4Q96DX8 DUX4L6-201ENST00000626483 1275 ntBASIC21.17■□□□□ 0.98
RTP4Q96DX8 DUX4L1-201ENST00000627662 1275 ntBASIC21.17■□□□□ 0.98
RTP4Q96DX8 DUX4L8-201ENST00000629013 1275 ntBASIC21.17■□□□□ 0.98
RTP4Q96DX8 DUX4L3-201ENST00000630187 1275 ntBASIC21.17■□□□□ 0.98
RTP4Q96DX8 DUX4L7-201ENST00000630678 1275 ntBASIC21.17■□□□□ 0.98
RTP4Q96DX8 DUX4L5-201ENST00000630834 1275 ntBASIC21.17■□□□□ 0.98
RTP4Q96DX8 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RTP4Q96DX8 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RTP4Q96DX8 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
RTP4Q96DX8 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.17■□□□□ 0.98
RTP4Q96DX8 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RTP4Q96DX8 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
RTP4Q96DX8 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
RTP4Q96DX8 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RTP4Q96DX8 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.16■□□□□ 0.98
RTP4Q96DX8 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RTP4Q96DX8 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.16■□□□□ 0.98
RTP4Q96DX8 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RTP4Q96DX8 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RTP4Q96DX8 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RTP4Q96DX8 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
RTP4Q96DX8 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
RTP4Q96DX8 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RTP4Q96DX8 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.16■□□□□ 0.98
RTP4Q96DX8 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RTP4Q96DX8 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
RTP4Q96DX8 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RTP4Q96DX8 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.16■□□□□ 0.98
RTP4Q96DX8 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RTP4Q96DX8 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RTP4Q96DX8 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
RTP4Q96DX8 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
RTP4Q96DX8 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RTP4Q96DX8 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RTP4Q96DX8 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
RTP4Q96DX8 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
RTP4Q96DX8 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.15■□□□□ 0.98
RTP4Q96DX8 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.15■□□□□ 0.98
RTP4Q96DX8 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
RTP4Q96DX8 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RTP4Q96DX8 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.15■□□□□ 0.98
RTP4Q96DX8 AC022517.1-201ENST00000592429 346 ntBASIC21.15■□□□□ 0.98
RTP4Q96DX8 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RTP4Q96DX8 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RTP4Q96DX8 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RTP4Q96DX8 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.15■□□□□ 0.98
RTP4Q96DX8 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RTP4Q96DX8 SLC25A24-204ENST00000569674 2357 ntBASIC21.15■□□□□ 0.98
RTP4Q96DX8 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RTP4Q96DX8 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.98
RTP4Q96DX8 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.14■□□□□ 0.98
RTP4Q96DX8 AC020907.5-201ENST00000624372 1936 ntBASIC21.14■□□□□ 0.98
RTP4Q96DX8 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.14■□□□□ 0.97
RTP4Q96DX8 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.14■□□□□ 0.97
RTP4Q96DX8 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.14■□□□□ 0.97
RTP4Q96DX8 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.14■□□□□ 0.97
RTP4Q96DX8 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.14■□□□□ 0.97
RTP4Q96DX8 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.14■□□□□ 0.97
RTP4Q96DX8 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
RTP4Q96DX8 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
RTP4Q96DX8 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.14■□□□□ 0.97
RTP4Q96DX8 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
RTP4Q96DX8 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
RTP4Q96DX8 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RTP4Q96DX8 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RTP4Q96DX8 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
RTP4Q96DX8 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
RTP4Q96DX8 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.13■□□□□ 0.97
RTP4Q96DX8 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RTP4Q96DX8 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
RTP4Q96DX8 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
RTP4Q96DX8 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RTP4Q96DX8 AC245052.3-201ENST00000450182 901 ntBASIC21.13■□□□□ 0.97
RTP4Q96DX8 AC104187.1-201ENST00000607510 612 ntBASIC21.13■□□□□ 0.97
RTP4Q96DX8 IKBKGP1-201ENST00000612193 1073 ntBASIC21.13■□□□□ 0.97
RTP4Q96DX8 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.13■□□□□ 0.97
RTP4Q96DX8 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RTP4Q96DX8 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RTP4Q96DX8 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
RTP4Q96DX8 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.13■□□□□ 0.97
RTP4Q96DX8 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RTP4Q96DX8 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
RTP4Q96DX8 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.12■□□□□ 0.97
RTP4Q96DX8 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RTP4Q96DX8 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RTP4Q96DX8 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RTP4Q96DX8 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms