Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
SH3KBP1Q96B97 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
SH3KBP1Q96B97 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SH3KBP1Q96B97 KRT16P2-201ENST00000414673 1423 ntBASIC20.49■□□□□ 0.87
SH3KBP1Q96B97 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SH3KBP1Q96B97 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SH3KBP1Q96B97 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SH3KBP1Q96B97 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.49■□□□□ 0.87
SH3KBP1Q96B97 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SH3KBP1Q96B97 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SH3KBP1Q96B97 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.48■□□□□ 0.87
SH3KBP1Q96B97 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SH3KBP1Q96B97 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
SH3KBP1Q96B97 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.48■□□□□ 0.87
SH3KBP1Q96B97 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.48■□□□□ 0.87
SH3KBP1Q96B97 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.48■□□□□ 0.87
SH3KBP1Q96B97 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.48■□□□□ 0.87
SH3KBP1Q96B97 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SH3KBP1Q96B97 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
SH3KBP1Q96B97 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SH3KBP1Q96B97 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SH3KBP1Q96B97 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.48■□□□□ 0.87
SH3KBP1Q96B97 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.48■□□□□ 0.87
SH3KBP1Q96B97 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.48■□□□□ 0.87
SH3KBP1Q96B97 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.48■□□□□ 0.87
SH3KBP1Q96B97 AC104771.1-201ENST00000603335 964 ntBASIC20.48■□□□□ 0.87
SH3KBP1Q96B97 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
SH3KBP1Q96B97 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SH3KBP1Q96B97 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
SH3KBP1Q96B97 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.48■□□□□ 0.87
SH3KBP1Q96B97 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SH3KBP1Q96B97 AC026310.3-201ENST00000625186 2373 ntBASIC20.48■□□□□ 0.87
SH3KBP1Q96B97 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SH3KBP1Q96B97 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SH3KBP1Q96B97 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SH3KBP1Q96B97 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
SH3KBP1Q96B97 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
SH3KBP1Q96B97 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SH3KBP1Q96B97 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.47■□□□□ 0.87
SH3KBP1Q96B97 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.47■□□□□ 0.87
SH3KBP1Q96B97 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SH3KBP1Q96B97 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SH3KBP1Q96B97 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SH3KBP1Q96B97 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SH3KBP1Q96B97 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.47■□□□□ 0.87
SH3KBP1Q96B97 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SH3KBP1Q96B97 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.46■□□□□ 0.87
SH3KBP1Q96B97 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SH3KBP1Q96B97 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
SH3KBP1Q96B97 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SH3KBP1Q96B97 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SH3KBP1Q96B97 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SH3KBP1Q96B97 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.46■□□□□ 0.87
SH3KBP1Q96B97 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.46■□□□□ 0.87
SH3KBP1Q96B97 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
SH3KBP1Q96B97 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SH3KBP1Q96B97 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
SH3KBP1Q96B97 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.45■□□□□ 0.86
SH3KBP1Q96B97 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.45■□□□□ 0.86
SH3KBP1Q96B97 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SH3KBP1Q96B97 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SH3KBP1Q96B97 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
SH3KBP1Q96B97 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
SH3KBP1Q96B97 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
SH3KBP1Q96B97 CNN2P6-201ENST00000439038 900 ntBASIC20.45■□□□□ 0.86
SH3KBP1Q96B97 AC007322.4-201ENST00000509611 723 ntBASIC20.45■□□□□ 0.86
SH3KBP1Q96B97 AC083906.2-201ENST00000511578 360 ntBASIC20.45■□□□□ 0.86
SH3KBP1Q96B97 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.45■□□□□ 0.86
SH3KBP1Q96B97 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SH3KBP1Q96B97 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SH3KBP1Q96B97 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
SH3KBP1Q96B97 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SH3KBP1Q96B97 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.45■□□□□ 0.86
SH3KBP1Q96B97 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.45■□□□□ 0.86
SH3KBP1Q96B97 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SH3KBP1Q96B97 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.44■□□□□ 0.86
SH3KBP1Q96B97 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.44■□□□□ 0.86
SH3KBP1Q96B97 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SH3KBP1Q96B97 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SH3KBP1Q96B97 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SH3KBP1Q96B97 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
SH3KBP1Q96B97 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SH3KBP1Q96B97 AC244015.2-201ENST00000616358 1861 ntBASIC20.44■□□□□ 0.86
SH3KBP1Q96B97 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
SH3KBP1Q96B97 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.44■□□□□ 0.86
SH3KBP1Q96B97 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.44■□□□□ 0.86
SH3KBP1Q96B97 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.44■□□□□ 0.86
SH3KBP1Q96B97 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.44■□□□□ 0.86
SH3KBP1Q96B97 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.44■□□□□ 0.86
SH3KBP1Q96B97 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
SH3KBP1Q96B97 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SH3KBP1Q96B97 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
SH3KBP1Q96B97 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
SH3KBP1Q96B97 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SH3KBP1Q96B97 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SH3KBP1Q96B97 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SH3KBP1Q96B97 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SH3KBP1Q96B97 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.43■□□□□ 0.86
SH3KBP1Q96B97 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
SH3KBP1Q96B97 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms