Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPNE4Q96A23 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CPNE4Q96A23 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPNE4Q96A23 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.61■□□□□ 0.57
CPNE4Q96A23 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CPNE4Q96A23 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.61■□□□□ 0.57
CPNE4Q96A23 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPNE4Q96A23 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPNE4Q96A23 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.61■□□□□ 0.57
CPNE4Q96A23 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.61■□□□□ 0.57
CPNE4Q96A23 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPNE4Q96A23 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.61■□□□□ 0.57
CPNE4Q96A23 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.61■□□□□ 0.57
CPNE4Q96A23 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.61■□□□□ 0.57
CPNE4Q96A23 AL162412.1-201ENST00000567129 965 ntBASIC18.61■□□□□ 0.57
CPNE4Q96A23 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.61■□□□□ 0.57
CPNE4Q96A23 AL591742.1-201ENST00000604433 565 ntBASIC18.61■□□□□ 0.57
CPNE4Q96A23 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.61■□□□□ 0.57
CPNE4Q96A23 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CPNE4Q96A23 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPNE4Q96A23 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.61■□□□□ 0.57
CPNE4Q96A23 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CPNE4Q96A23 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CPNE4Q96A23 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE4Q96A23 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE4Q96A23 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.6■□□□□ 0.57
CPNE4Q96A23 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE4Q96A23 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE4Q96A23 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE4Q96A23 AC006970.2-201ENST00000450065 779 ntBASIC18.6■□□□□ 0.57
CPNE4Q96A23 AC005181.1-201ENST00000604782 1256 ntBASIC18.6■□□□□ 0.57
CPNE4Q96A23 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CPNE4Q96A23 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE4Q96A23 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE4Q96A23 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE4Q96A23 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CPNE4Q96A23 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.6■□□□□ 0.57
CPNE4Q96A23 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CPNE4Q96A23 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CPNE4Q96A23 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPNE4Q96A23 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPNE4Q96A23 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPNE4Q96A23 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CPNE4Q96A23 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.59■□□□□ 0.57
CPNE4Q96A23 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CPNE4Q96A23 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPNE4Q96A23 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPNE4Q96A23 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.59■□□□□ 0.57
CPNE4Q96A23 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPNE4Q96A23 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPNE4Q96A23 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CPNE4Q96A23 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPNE4Q96A23 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
CPNE4Q96A23 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CPNE4Q96A23 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CPNE4Q96A23 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CPNE4Q96A23 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CPNE4Q96A23 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.58■□□□□ 0.57
CPNE4Q96A23 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.58■□□□□ 0.57
CPNE4Q96A23 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CPNE4Q96A23 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.57
CPNE4Q96A23 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CPNE4Q96A23 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.58■□□□□ 0.56
CPNE4Q96A23 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CPNE4Q96A23 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CPNE4Q96A23 MIR663A-201ENST00000385250 93 ntBASIC18.58■□□□□ 0.56
CPNE4Q96A23 AC091799.1-201ENST00000422823 811 ntBASIC18.58■□□□□ 0.56
CPNE4Q96A23 CDV3P1-201ENST00000471403 739 ntBASIC18.58■□□□□ 0.56
CPNE4Q96A23 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.58■□□□□ 0.56
CPNE4Q96A23 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CPNE4Q96A23 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.58■□□□□ 0.56
CPNE4Q96A23 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CPNE4Q96A23 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.58■□□□□ 0.56
CPNE4Q96A23 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.58■□□□□ 0.56
CPNE4Q96A23 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.58■□□□□ 0.56
CPNE4Q96A23 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.58■□□□□ 0.56
CPNE4Q96A23 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CPNE4Q96A23 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CPNE4Q96A23 AC068338.2-201ENST00000563278 1430 ntBASIC18.57■□□□□ 0.56
CPNE4Q96A23 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
CPNE4Q96A23 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.57■□□□□ 0.56
CPNE4Q96A23 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE4Q96A23 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.57■□□□□ 0.56
CPNE4Q96A23 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.57■□□□□ 0.56
CPNE4Q96A23 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE4Q96A23 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.57■□□□□ 0.56
CPNE4Q96A23 CROCCP5-201ENST00000436658 830 ntBASIC18.57■□□□□ 0.56
CPNE4Q96A23 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE4Q96A23 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.57■□□□□ 0.56
CPNE4Q96A23 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.57■□□□□ 0.56
CPNE4Q96A23 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
CPNE4Q96A23 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE4Q96A23 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE4Q96A23 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.57■□□□□ 0.56
CPNE4Q96A23 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.57■□□□□ 0.56
CPNE4Q96A23 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE4Q96A23 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE4Q96A23 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CPNE4Q96A23 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE4Q96A23 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms