Protein–RNA interactions for Protein: Q969K3

RNF34, E3 ubiquitin-protein ligase RNF34, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF34Q969K3 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF34Q969K3 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.68■■□□□ 1.06
RNF34Q969K3 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.68■■□□□ 1.06
RNF34Q969K3 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RNF34Q969K3 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RNF34Q969K3 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.68■■□□□ 1.06
RNF34Q969K3 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.68■■□□□ 1.06
RNF34Q969K3 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.68■■□□□ 1.06
RNF34Q969K3 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF34Q969K3 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF34Q969K3 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.68■■□□□ 1.06
RNF34Q969K3 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.68■■□□□ 1.06
RNF34Q969K3 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.68■■□□□ 1.06
RNF34Q969K3 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF34Q969K3 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RNF34Q969K3 AIRN-201ENST00000601203 4374 ntBASIC21.68■■□□□ 1.06
RNF34Q969K3 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF34Q969K3 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.67■■□□□ 1.06
RNF34Q969K3 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RNF34Q969K3 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.67■■□□□ 1.06
RNF34Q969K3 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RNF34Q969K3 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF34Q969K3 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF34Q969K3 TERF1P5-201ENST00000477545 1207 ntBASIC21.67■■□□□ 1.06
RNF34Q969K3 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.67■■□□□ 1.06
RNF34Q969K3 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.67■■□□□ 1.06
RNF34Q969K3 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RNF34Q969K3 AL024507.2-201ENST00000606070 2574 ntBASIC21.67■■□□□ 1.06
RNF34Q969K3 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF34Q969K3 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RNF34Q969K3 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.66■■□□□ 1.06
RNF34Q969K3 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF34Q969K3 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.66■■□□□ 1.06
RNF34Q969K3 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.66■■□□□ 1.06
RNF34Q969K3 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.66■■□□□ 1.06
RNF34Q969K3 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.66■■□□□ 1.06
RNF34Q969K3 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.66■■□□□ 1.06
RNF34Q969K3 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.66■■□□□ 1.06
RNF34Q969K3 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF34Q969K3 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RNF34Q969K3 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
RNF34Q969K3 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF34Q969K3 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RNF34Q969K3 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF34Q969K3 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF34Q969K3 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF34Q969K3 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF34Q969K3 AC026310.3-201ENST00000625186 2373 ntBASIC21.65■■□□□ 1.06
RNF34Q969K3 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF34Q969K3 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RNF34Q969K3 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.65■■□□□ 1.06
RNF34Q969K3 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.65■■□□□ 1.06
RNF34Q969K3 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.65■■□□□ 1.06
RNF34Q969K3 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RNF34Q969K3 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
RNF34Q969K3 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF34Q969K3 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF34Q969K3 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.65■■□□□ 1.06
RNF34Q969K3 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
RNF34Q969K3 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF34Q969K3 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.65■■□□□ 1.06
RNF34Q969K3 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
RNF34Q969K3 RBM17P2-201ENST00000616397 1405 ntBASIC21.64■■□□□ 1.06
RNF34Q969K3 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.64■■□□□ 1.06
RNF34Q969K3 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
RNF34Q969K3 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RNF34Q969K3 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
RNF34Q969K3 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RNF34Q969K3 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.64■■□□□ 1.05
RNF34Q969K3 DUX4L16-201ENST00000555130 1264 ntBASIC21.64■■□□□ 1.05
RNF34Q969K3 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.64■■□□□ 1.05
RNF34Q969K3 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.64■■□□□ 1.05
RNF34Q969K3 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
RNF34Q969K3 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RNF34Q969K3 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
RNF34Q969K3 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.64■■□□□ 1.05
RNF34Q969K3 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RNF34Q969K3 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RNF34Q969K3 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
RNF34Q969K3 FEM1AP4-201ENST00000443167 1987 ntBASIC21.63■■□□□ 1.05
RNF34Q969K3 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RNF34Q969K3 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RNF34Q969K3 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RNF34Q969K3 AC007322.1-201ENST00000426983 750 ntBASIC21.63■■□□□ 1.05
RNF34Q969K3 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RNF34Q969K3 AC013268.1-206ENST00000638368 961 ntBASIC21.63■■□□□ 1.05
RNF34Q969K3 AC112229.1-201ENST00000639295 961 ntBASIC21.63■■□□□ 1.05
RNF34Q969K3 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.63■■□□□ 1.05
RNF34Q969K3 AC073111.5-205ENST00000641717 521 ntBASIC21.63■■□□□ 1.05
RNF34Q969K3 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
RNF34Q969K3 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.62■■□□□ 1.05
RNF34Q969K3 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
RNF34Q969K3 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.62■■□□□ 1.05
RNF34Q969K3 AC231657.2-201ENST00000624556 255 ntBASIC21.62■■□□□ 1.05
RNF34Q969K3 RARRES2P11-201ENST00000635158 484 ntBASIC21.62■■□□□ 1.05
RNF34Q969K3 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RNF34Q969K3 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.62■■□□□ 1.05
RNF34Q969K3 AF106564.1-201ENST00000607058 2553 ntBASIC21.62■■□□□ 1.05
RNF34Q969K3 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
RNF34Q969K3 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms