Protein–RNA interactions for Protein: Q92538

GBF1, Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1, humanhuman

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GBF1Q92538 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
GBF1Q92538 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
GBF1Q92538 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC22.42■■□□□ 1.18
GBF1Q92538 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC22.42■■□□□ 1.18
GBF1Q92538 SERF2-207ENST00000409614 582 ntTSL 2 BASIC22.42■■□□□ 1.18
GBF1Q92538 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC22.42■■□□□ 1.18
GBF1Q92538 AC113410.3-201ENST00000623366 203 ntBASIC22.42■■□□□ 1.18
GBF1Q92538 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
GBF1Q92538 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
GBF1Q92538 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC22.42■■□□□ 1.18
GBF1Q92538 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC22.42■■□□□ 1.18
GBF1Q92538 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
GBF1Q92538 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC22.42■■□□□ 1.18
GBF1Q92538 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
GBF1Q92538 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC22.42■■□□□ 1.18
GBF1Q92538 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC22.42■■□□□ 1.18
GBF1Q92538 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC22.41■■□□□ 1.18
GBF1Q92538 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
GBF1Q92538 TK2-213ENST00000563369 882 ntTSL 5 BASIC22.41■■□□□ 1.18
GBF1Q92538 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC22.41■■□□□ 1.18
GBF1Q92538 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
GBF1Q92538 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
GBF1Q92538 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC22.41■■□□□ 1.18
GBF1Q92538 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
GBF1Q92538 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
GBF1Q92538 MIR4785-201ENST00000585005 73 ntBASIC22.41■■□□□ 1.18
GBF1Q92538 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
GBF1Q92538 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
GBF1Q92538 KRT17P2-201ENST00000300992 1314 ntBASIC22.4■■□□□ 1.18
GBF1Q92538 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC22.4■■□□□ 1.18
GBF1Q92538 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC22.4■■□□□ 1.18
GBF1Q92538 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
GBF1Q92538 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
GBF1Q92538 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
GBF1Q92538 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC22.4■■□□□ 1.18
GBF1Q92538 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC22.4■■□□□ 1.18
GBF1Q92538 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
GBF1Q92538 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
GBF1Q92538 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
GBF1Q92538 TK2-204ENST00000525974 1178 ntTSL 2 BASIC22.4■■□□□ 1.18
GBF1Q92538 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
GBF1Q92538 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC22.4■■□□□ 1.18
GBF1Q92538 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC22.4■■□□□ 1.18
GBF1Q92538 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC22.4■■□□□ 1.18
GBF1Q92538 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
GBF1Q92538 AC097493.4-201ENST00000641197 219 ntBASIC22.4■■□□□ 1.18
GBF1Q92538 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
GBF1Q92538 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC22.4■■□□□ 1.18
GBF1Q92538 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
GBF1Q92538 C11orf96-202ENST00000528572 1834 ntBASIC22.39■■□□□ 1.18
GBF1Q92538 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC22.39■■□□□ 1.18
GBF1Q92538 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC22.39■■□□□ 1.18
GBF1Q92538 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC22.39■■□□□ 1.18
GBF1Q92538 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
GBF1Q92538 TMPOP1-202ENST00000424642 1267 ntBASIC22.39■■□□□ 1.18
GBF1Q92538 AC245052.3-201ENST00000450182 901 ntBASIC22.39■■□□□ 1.18
GBF1Q92538 HES2-205ENST00000487437 968 ntTSL 3 BASIC22.39■■□□□ 1.18
GBF1Q92538 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC22.39■■□□□ 1.18
GBF1Q92538 C2orf69P4-201ENST00000565394 541 ntBASIC22.39■■□□□ 1.18
GBF1Q92538 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
GBF1Q92538 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.18
GBF1Q92538 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
GBF1Q92538 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
GBF1Q92538 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC22.39■■□□□ 1.17
GBF1Q92538 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
GBF1Q92538 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC22.39■■□□□ 1.17
GBF1Q92538 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC22.39■■□□□ 1.17
GBF1Q92538 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC22.39■■□□□ 1.17
GBF1Q92538 AC139530.1-201ENST00000575312 1977 ntBASIC22.38■■□□□ 1.17
GBF1Q92538 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC22.38■■□□□ 1.17
GBF1Q92538 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC22.38■■□□□ 1.17
GBF1Q92538 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC22.38■■□□□ 1.17
GBF1Q92538 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC22.38■■□□□ 1.17
GBF1Q92538 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
GBF1Q92538 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
GBF1Q92538 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC22.38■■□□□ 1.17
GBF1Q92538 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
GBF1Q92538 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
GBF1Q92538 ME2-208ENST00000638937 2471 ntTSL 5 BASIC22.38■■□□□ 1.17
GBF1Q92538 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
GBF1Q92538 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
GBF1Q92538 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC22.37■■□□□ 1.17
GBF1Q92538 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
GBF1Q92538 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
GBF1Q92538 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC22.37■■□□□ 1.17
GBF1Q92538 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC22.37■■□□□ 1.17
GBF1Q92538 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
GBF1Q92538 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC22.37■■□□□ 1.17
GBF1Q92538 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
GBF1Q92538 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
GBF1Q92538 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
GBF1Q92538 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
GBF1Q92538 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
GBF1Q92538 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC22.37■■□□□ 1.17
GBF1Q92538 AC137767.1-201ENST00000602918 1920 ntBASIC22.37■■□□□ 1.17
GBF1Q92538 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
GBF1Q92538 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC22.37■■□□□ 1.17
GBF1Q92538 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
GBF1Q92538 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
GBF1Q92538 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms