Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SHROOM3Q8TF72 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SHROOM3Q8TF72 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.19■□□□□ 0.98
SHROOM3Q8TF72 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC21.19■□□□□ 0.98
SHROOM3Q8TF72 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SHROOM3Q8TF72 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
SHROOM3Q8TF72 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SHROOM3Q8TF72 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
SHROOM3Q8TF72 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.19■□□□□ 0.98
SHROOM3Q8TF72 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.19■□□□□ 0.98
SHROOM3Q8TF72 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
SHROOM3Q8TF72 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.19■□□□□ 0.98
SHROOM3Q8TF72 AC013268.1-206ENST00000638368 961 ntBASIC21.19■□□□□ 0.98
SHROOM3Q8TF72 AC112229.1-201ENST00000639295 961 ntBASIC21.19■□□□□ 0.98
SHROOM3Q8TF72 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
SHROOM3Q8TF72 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SHROOM3Q8TF72 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.18■□□□□ 0.98
SHROOM3Q8TF72 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SHROOM3Q8TF72 AL355802.2-201ENST00000402069 882 ntBASIC21.18■□□□□ 0.98
SHROOM3Q8TF72 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.18■□□□□ 0.98
SHROOM3Q8TF72 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.18■□□□□ 0.98
SHROOM3Q8TF72 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.18■□□□□ 0.98
SHROOM3Q8TF72 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.18■□□□□ 0.98
SHROOM3Q8TF72 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SHROOM3Q8TF72 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.18■□□□□ 0.98
SHROOM3Q8TF72 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SHROOM3Q8TF72 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SHROOM3Q8TF72 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SHROOM3Q8TF72 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.17■□□□□ 0.98
SHROOM3Q8TF72 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
SHROOM3Q8TF72 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC21.17■□□□□ 0.98
SHROOM3Q8TF72 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.17■□□□□ 0.98
SHROOM3Q8TF72 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SHROOM3Q8TF72 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.17■□□□□ 0.98
SHROOM3Q8TF72 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SHROOM3Q8TF72 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SHROOM3Q8TF72 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
SHROOM3Q8TF72 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.17■□□□□ 0.98
SHROOM3Q8TF72 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SHROOM3Q8TF72 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.17■□□□□ 0.98
SHROOM3Q8TF72 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
SHROOM3Q8TF72 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.17■□□□□ 0.98
SHROOM3Q8TF72 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SHROOM3Q8TF72 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SHROOM3Q8TF72 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SHROOM3Q8TF72 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
SHROOM3Q8TF72 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.17■□□□□ 0.98
SHROOM3Q8TF72 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.17■□□□□ 0.98
SHROOM3Q8TF72 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.17■□□□□ 0.98
SHROOM3Q8TF72 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.17■□□□□ 0.98
SHROOM3Q8TF72 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.17■□□□□ 0.98
SHROOM3Q8TF72 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SHROOM3Q8TF72 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SHROOM3Q8TF72 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SHROOM3Q8TF72 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SHROOM3Q8TF72 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.16■□□□□ 0.98
SHROOM3Q8TF72 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
SHROOM3Q8TF72 AC091799.1-201ENST00000422823 811 ntBASIC21.16■□□□□ 0.98
SHROOM3Q8TF72 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
SHROOM3Q8TF72 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
SHROOM3Q8TF72 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SHROOM3Q8TF72 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
SHROOM3Q8TF72 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.16■□□□□ 0.98
SHROOM3Q8TF72 AL157384.1-201ENST00000445995 2473 ntBASIC21.16■□□□□ 0.98
SHROOM3Q8TF72 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SHROOM3Q8TF72 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.16■□□□□ 0.98
SHROOM3Q8TF72 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SHROOM3Q8TF72 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SHROOM3Q8TF72 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SHROOM3Q8TF72 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
SHROOM3Q8TF72 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.16■□□□□ 0.98
SHROOM3Q8TF72 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SHROOM3Q8TF72 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.15■□□□□ 0.98
SHROOM3Q8TF72 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.15■□□□□ 0.98
SHROOM3Q8TF72 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SHROOM3Q8TF72 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SHROOM3Q8TF72 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SHROOM3Q8TF72 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.15■□□□□ 0.98
SHROOM3Q8TF72 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.15■□□□□ 0.98
SHROOM3Q8TF72 AC010536.3-201ENST00000620306 533 ntBASIC21.15■□□□□ 0.98
SHROOM3Q8TF72 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SHROOM3Q8TF72 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SHROOM3Q8TF72 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.14■□□□□ 0.98
SHROOM3Q8TF72 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.14■□□□□ 0.98
SHROOM3Q8TF72 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SHROOM3Q8TF72 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
SHROOM3Q8TF72 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.14■□□□□ 0.98
SHROOM3Q8TF72 CDCA4P2-201ENST00000441182 718 ntBASIC21.14■□□□□ 0.98
SHROOM3Q8TF72 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
SHROOM3Q8TF72 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SHROOM3Q8TF72 AC116050.2-201ENST00000612102 1779 ntBASIC21.14■□□□□ 0.97
SHROOM3Q8TF72 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.14■□□□□ 0.97
SHROOM3Q8TF72 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SHROOM3Q8TF72 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SHROOM3Q8TF72 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.14■□□□□ 0.97
SHROOM3Q8TF72 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.14■□□□□ 0.97
SHROOM3Q8TF72 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.14■□□□□ 0.97
SHROOM3Q8TF72 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
SHROOM3Q8TF72 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SHROOM3Q8TF72 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms