Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
CFAP43Q8NDM7 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
CFAP43Q8NDM7 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
CFAP43Q8NDM7 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC32.72■■■□□ 2.83
CFAP43Q8NDM7 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
CFAP43Q8NDM7 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC32.72■■■□□ 2.83
CFAP43Q8NDM7 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC32.72■■■□□ 2.83
CFAP43Q8NDM7 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
CFAP43Q8NDM7 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC32.72■■■□□ 2.83
CFAP43Q8NDM7 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
CFAP43Q8NDM7 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC32.72■■■□□ 2.83
CFAP43Q8NDM7 AL355472.2-201ENST00000422958 438 ntBASIC32.72■■■□□ 2.83
CFAP43Q8NDM7 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC32.72■■■□□ 2.83
CFAP43Q8NDM7 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC32.72■■■□□ 2.83
CFAP43Q8NDM7 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC32.72■■■□□ 2.83
CFAP43Q8NDM7 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
CFAP43Q8NDM7 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
CFAP43Q8NDM7 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC32.71■■■□□ 2.83
CFAP43Q8NDM7 KLF2-202ENST00000592003 564 ntTSL 3 BASIC32.71■■■□□ 2.83
CFAP43Q8NDM7 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
CFAP43Q8NDM7 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC32.71■■■□□ 2.83
CFAP43Q8NDM7 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
CFAP43Q8NDM7 KRT17P3-201ENST00000420566 1262 ntBASIC32.7■■■□□ 2.83
CFAP43Q8NDM7 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC32.7■■■□□ 2.83
CFAP43Q8NDM7 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
CFAP43Q8NDM7 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC32.7■■■□□ 2.82
CFAP43Q8NDM7 NARF-205ENST00000412079 1760 ntTSL 5 BASIC32.7■■■□□ 2.82
CFAP43Q8NDM7 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.82
CFAP43Q8NDM7 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.82
CFAP43Q8NDM7 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC32.7■■■□□ 2.82
CFAP43Q8NDM7 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
CFAP43Q8NDM7 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC32.69■■■□□ 2.82
CFAP43Q8NDM7 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC32.69■■■□□ 2.82
CFAP43Q8NDM7 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC32.69■■■□□ 2.82
CFAP43Q8NDM7 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC32.69■■■□□ 2.82
CFAP43Q8NDM7 TERT-206ENST00000508104 2486 ntTSL 5 BASIC32.69■■■□□ 2.82
CFAP43Q8NDM7 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC32.69■■■□□ 2.82
CFAP43Q8NDM7 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
CFAP43Q8NDM7 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC32.69■■■□□ 2.82
CFAP43Q8NDM7 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC32.69■■■□□ 2.82
CFAP43Q8NDM7 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC32.69■■■□□ 2.82
CFAP43Q8NDM7 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC32.69■■■□□ 2.82
CFAP43Q8NDM7 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC32.68■■■□□ 2.82
CFAP43Q8NDM7 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
CFAP43Q8NDM7 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC32.68■■■□□ 2.82
CFAP43Q8NDM7 REXO1L12P-201ENST00000622156 912 ntBASIC32.68■■■□□ 2.82
CFAP43Q8NDM7 AC233723.2-201ENST00000623798 2106 ntBASIC32.68■■■□□ 2.82
CFAP43Q8NDM7 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC32.68■■■□□ 2.82
CFAP43Q8NDM7 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC32.68■■■□□ 2.82
CFAP43Q8NDM7 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
CFAP43Q8NDM7 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
CFAP43Q8NDM7 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
CFAP43Q8NDM7 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC32.67■■■□□ 2.82
CFAP43Q8NDM7 SPIB-206ENST00000596074 847 ntTSL 2 BASIC32.67■■■□□ 2.82
CFAP43Q8NDM7 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC32.67■■■□□ 2.82
CFAP43Q8NDM7 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC32.67■■■□□ 2.82
CFAP43Q8NDM7 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC32.67■■■□□ 2.82
CFAP43Q8NDM7 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
CFAP43Q8NDM7 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
CFAP43Q8NDM7 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
CFAP43Q8NDM7 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC32.66■■■□□ 2.82
CFAP43Q8NDM7 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
CFAP43Q8NDM7 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
CFAP43Q8NDM7 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC32.66■■■□□ 2.82
CFAP43Q8NDM7 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC32.66■■■□□ 2.82
CFAP43Q8NDM7 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC32.66■■■□□ 2.82
CFAP43Q8NDM7 STX5-203ENST00000394690 1568 ntTSL 5 BASIC32.66■■■□□ 2.82
CFAP43Q8NDM7 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC32.66■■■□□ 2.82
CFAP43Q8NDM7 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
CFAP43Q8NDM7 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC32.66■■■□□ 2.82
CFAP43Q8NDM7 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC32.66■■■□□ 2.82
CFAP43Q8NDM7 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC32.66■■■□□ 2.82
CFAP43Q8NDM7 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC32.66■■■□□ 2.82
CFAP43Q8NDM7 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC32.66■■■□□ 2.82
CFAP43Q8NDM7 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC32.66■■■□□ 2.82
CFAP43Q8NDM7 REXO2-216ENST00000544196 452 ntTSL 3 BASIC32.66■■■□□ 2.82
CFAP43Q8NDM7 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC32.65■■■□□ 2.82
CFAP43Q8NDM7 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
CFAP43Q8NDM7 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
CFAP43Q8NDM7 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC32.65■■■□□ 2.82
CFAP43Q8NDM7 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
CFAP43Q8NDM7 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC32.65■■■□□ 2.82
CFAP43Q8NDM7 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
CFAP43Q8NDM7 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC32.65■■■□□ 2.82
CFAP43Q8NDM7 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC32.65■■■□□ 2.82
CFAP43Q8NDM7 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
CFAP43Q8NDM7 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
CFAP43Q8NDM7 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
CFAP43Q8NDM7 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
CFAP43Q8NDM7 DHDH-203ENST00000522614 776 ntTSL 5 BASIC32.65■■■□□ 2.82
CFAP43Q8NDM7 PPOX-219ENST00000544598 813 ntTSL 2 BASIC32.65■■■□□ 2.82
CFAP43Q8NDM7 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC32.65■■■□□ 2.82
CFAP43Q8NDM7 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
CFAP43Q8NDM7 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC32.65■■■□□ 2.82
CFAP43Q8NDM7 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC32.64■■■□□ 2.82
CFAP43Q8NDM7 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC32.64■■■□□ 2.82
CFAP43Q8NDM7 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC32.64■■■□□ 2.82
CFAP43Q8NDM7 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
CFAP43Q8NDM7 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC32.64■■■□□ 2.82
CFAP43Q8NDM7 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC32.64■■■□□ 2.82
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms