Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC28Q86X40 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.38■□□□□ 0.53
LRRC28Q86X40 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.38■□□□□ 0.53
LRRC28Q86X40 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC28Q86X40 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.38■□□□□ 0.53
LRRC28Q86X40 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
LRRC28Q86X40 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC28Q86X40 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
LRRC28Q86X40 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC28Q86X40 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC28Q86X40 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC28Q86X40 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC28Q86X40 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC28Q86X40 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.38■□□□□ 0.53
LRRC28Q86X40 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRC28Q86X40 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LRRC28Q86X40 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LRRC28Q86X40 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.37■□□□□ 0.53
LRRC28Q86X40 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LRRC28Q86X40 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.37■□□□□ 0.53
LRRC28Q86X40 MIR572-201ENST00000384983 95 ntBASIC18.37■□□□□ 0.53
LRRC28Q86X40 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.37■□□□□ 0.53
LRRC28Q86X40 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.37■□□□□ 0.53
LRRC28Q86X40 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRC28Q86X40 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRC28Q86X40 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.37■□□□□ 0.53
LRRC28Q86X40 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRC28Q86X40 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LRRC28Q86X40 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LRRC28Q86X40 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LRRC28Q86X40 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.37■□□□□ 0.53
LRRC28Q86X40 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRC28Q86X40 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC28Q86X40 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC28Q86X40 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
LRRC28Q86X40 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC28Q86X40 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC28Q86X40 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC28Q86X40 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
LRRC28Q86X40 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC28Q86X40 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC28Q86X40 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC28Q86X40 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.36■□□□□ 0.53
LRRC28Q86X40 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC28Q86X40 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.36■□□□□ 0.53
LRRC28Q86X40 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.36■□□□□ 0.53
LRRC28Q86X40 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC28Q86X40 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC28Q86X40 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.36■□□□□ 0.53
LRRC28Q86X40 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
LRRC28Q86X40 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
LRRC28Q86X40 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC28Q86X40 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.35■□□□□ 0.53
LRRC28Q86X40 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
LRRC28Q86X40 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
LRRC28Q86X40 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC28Q86X40 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.35■□□□□ 0.53
LRRC28Q86X40 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC28Q86X40 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.35■□□□□ 0.53
LRRC28Q86X40 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC28Q86X40 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC28Q86X40 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC28Q86X40 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC28Q86X40 OR7E47P-201ENST00000546390 1422 ntBASIC18.35■□□□□ 0.53
LRRC28Q86X40 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
LRRC28Q86X40 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.35■□□□□ 0.53
LRRC28Q86X40 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
LRRC28Q86X40 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
LRRC28Q86X40 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC28Q86X40 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC28Q86X40 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.35■□□□□ 0.53
LRRC28Q86X40 AL031602.1-201ENST00000633169 911 ntBASIC18.35■□□□□ 0.53
LRRC28Q86X40 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.35■□□□□ 0.53
LRRC28Q86X40 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC28Q86X40 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC28Q86X40 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC28Q86X40 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.35■□□□□ 0.53
LRRC28Q86X40 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC28Q86X40 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC28Q86X40 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC28Q86X40 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.35■□□□□ 0.53
LRRC28Q86X40 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.34■□□□□ 0.53
LRRC28Q86X40 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.34■□□□□ 0.53
LRRC28Q86X40 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC28Q86X40 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC28Q86X40 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.34■□□□□ 0.53
LRRC28Q86X40 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.34■□□□□ 0.53
LRRC28Q86X40 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC28Q86X40 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
LRRC28Q86X40 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
LRRC28Q86X40 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC28Q86X40 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC28Q86X40 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
LRRC28Q86X40 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC28Q86X40 RARRES2P6-201ENST00000567333 442 ntBASIC18.34■□□□□ 0.53
LRRC28Q86X40 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.34■□□□□ 0.53
LRRC28Q86X40 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.34■□□□□ 0.53
LRRC28Q86X40 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC28Q86X40 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC28Q86X40 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms