Protein–RNA interactions for Protein: Q7Z401

DENND4A, C-myc promoter-binding protein, humanhuman

Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4AQ7Z401 KRT18P68-201ENST00000392293 1000 ntBASIC21.54■■□□□ 1.04
DENND4AQ7Z401 RPS2P55-201ENST00000397318 883 ntBASIC21.54■■□□□ 1.04
DENND4AQ7Z401 SERF2-207ENST00000409614 582 ntTSL 2 BASIC21.54■■□□□ 1.04
DENND4AQ7Z401 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC21.54■■□□□ 1.04
DENND4AQ7Z401 AC107956.1-201ENST00000494359 873 ntBASIC21.54■■□□□ 1.04
DENND4AQ7Z401 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
DENND4AQ7Z401 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
DENND4AQ7Z401 LY6E-205ENST00000519611 635 ntTSL 3 BASIC21.54■■□□□ 1.04
DENND4AQ7Z401 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC21.54■■□□□ 1.04
DENND4AQ7Z401 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
DENND4AQ7Z401 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.53■■□□□ 1.04
DENND4AQ7Z401 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
DENND4AQ7Z401 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
DENND4AQ7Z401 AC068473.5-201ENST00000616428 2072 ntBASIC21.53■■□□□ 1.04
DENND4AQ7Z401 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
DENND4AQ7Z401 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
DENND4AQ7Z401 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
DENND4AQ7Z401 TSPY7P-201ENST00000431358 1114 ntBASIC21.53■■□□□ 1.04
DENND4AQ7Z401 FAM210CP-201ENST00000445714 574 ntBASIC21.53■■□□□ 1.04
DENND4AQ7Z401 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC21.53■■□□□ 1.04
DENND4AQ7Z401 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
DENND4AQ7Z401 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC21.53■■□□□ 1.04
DENND4AQ7Z401 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC21.53■■□□□ 1.04
DENND4AQ7Z401 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
DENND4AQ7Z401 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
DENND4AQ7Z401 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
DENND4AQ7Z401 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.53■■□□□ 1.04
DENND4AQ7Z401 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
DENND4AQ7Z401 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
DENND4AQ7Z401 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
DENND4AQ7Z401 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
DENND4AQ7Z401 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
DENND4AQ7Z401 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC21.52■■□□□ 1.04
DENND4AQ7Z401 MTDHP1-201ENST00000605323 784 ntBASIC21.52■■□□□ 1.04
DENND4AQ7Z401 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
DENND4AQ7Z401 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.52■■□□□ 1.04
DENND4AQ7Z401 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC21.52■■□□□ 1.03
DENND4AQ7Z401 PPOX-219ENST00000544598 813 ntTSL 2 BASIC21.52■■□□□ 1.03
DENND4AQ7Z401 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.03
DENND4AQ7Z401 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
DENND4AQ7Z401 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
DENND4AQ7Z401 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
DENND4AQ7Z401 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
DENND4AQ7Z401 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
DENND4AQ7Z401 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
DENND4AQ7Z401 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
DENND4AQ7Z401 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.51■■□□□ 1.03
DENND4AQ7Z401 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
DENND4AQ7Z401 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
DENND4AQ7Z401 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC21.51■■□□□ 1.03
DENND4AQ7Z401 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
DENND4AQ7Z401 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
DENND4AQ7Z401 AL049637.2-201ENST00000641778 930 ntBASIC21.51■■□□□ 1.03
DENND4AQ7Z401 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
DENND4AQ7Z401 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
DENND4AQ7Z401 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
DENND4AQ7Z401 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
DENND4AQ7Z401 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.51■■□□□ 1.03
DENND4AQ7Z401 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.51■■□□□ 1.03
DENND4AQ7Z401 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
DENND4AQ7Z401 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
DENND4AQ7Z401 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
DENND4AQ7Z401 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
DENND4AQ7Z401 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC21.5■■□□□ 1.03
DENND4AQ7Z401 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
DENND4AQ7Z401 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
DENND4AQ7Z401 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.5■■□□□ 1.03
DENND4AQ7Z401 MFF-205ENST00000354503 1085 ntTSL 2 BASIC21.49■■□□□ 1.03
DENND4AQ7Z401 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
DENND4AQ7Z401 AC211429.1-201ENST00000415277 523 ntBASIC21.49■■□□□ 1.03
DENND4AQ7Z401 AC239809.2-201ENST00000415381 517 ntBASIC21.49■■□□□ 1.03
DENND4AQ7Z401 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
DENND4AQ7Z401 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
DENND4AQ7Z401 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
DENND4AQ7Z401 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC21.49■■□□□ 1.03
DENND4AQ7Z401 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
DENND4AQ7Z401 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
DENND4AQ7Z401 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
DENND4AQ7Z401 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.49■■□□□ 1.03
DENND4AQ7Z401 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC21.49■■□□□ 1.03
DENND4AQ7Z401 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
DENND4AQ7Z401 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
DENND4AQ7Z401 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.49■■□□□ 1.03
DENND4AQ7Z401 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
DENND4AQ7Z401 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC21.49■■□□□ 1.03
DENND4AQ7Z401 SNX21-213ENST00000614929 587 ntTSL 5 BASIC21.49■■□□□ 1.03
DENND4AQ7Z401 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
DENND4AQ7Z401 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.49■■□□□ 1.03
DENND4AQ7Z401 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
DENND4AQ7Z401 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC21.48■■□□□ 1.03
DENND4AQ7Z401 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.48■■□□□ 1.03
DENND4AQ7Z401 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
DENND4AQ7Z401 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
DENND4AQ7Z401 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
DENND4AQ7Z401 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
DENND4AQ7Z401 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
DENND4AQ7Z401 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.48■■□□□ 1.03
DENND4AQ7Z401 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.48■■□□□ 1.03
DENND4AQ7Z401 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.48■■□□□ 1.03
DENND4AQ7Z401 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms