Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
RFWD3Q6PCD5 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
RFWD3Q6PCD5 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.61■■□□□ 1.05
RFWD3Q6PCD5 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.61■■□□□ 1.05
RFWD3Q6PCD5 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.61■■□□□ 1.05
RFWD3Q6PCD5 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.61■■□□□ 1.05
RFWD3Q6PCD5 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RFWD3Q6PCD5 AC013268.1-206ENST00000638368 961 ntBASIC21.61■■□□□ 1.05
RFWD3Q6PCD5 AC112229.1-201ENST00000639295 961 ntBASIC21.61■■□□□ 1.05
RFWD3Q6PCD5 RBM17P2-201ENST00000616397 1405 ntBASIC21.61■■□□□ 1.05
RFWD3Q6PCD5 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
RFWD3Q6PCD5 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RFWD3Q6PCD5 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RFWD3Q6PCD5 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RFWD3Q6PCD5 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RFWD3Q6PCD5 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.6■■□□□ 1.05
RFWD3Q6PCD5 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RFWD3Q6PCD5 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.6■■□□□ 1.05
RFWD3Q6PCD5 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21.6■■□□□ 1.05
RFWD3Q6PCD5 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RFWD3Q6PCD5 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RFWD3Q6PCD5 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RFWD3Q6PCD5 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
RFWD3Q6PCD5 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.6■■□□□ 1.05
RFWD3Q6PCD5 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
RFWD3Q6PCD5 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RFWD3Q6PCD5 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RFWD3Q6PCD5 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.59■■□□□ 1.05
RFWD3Q6PCD5 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
RFWD3Q6PCD5 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RFWD3Q6PCD5 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RFWD3Q6PCD5 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.59■■□□□ 1.05
RFWD3Q6PCD5 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.59■■□□□ 1.05
RFWD3Q6PCD5 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RFWD3Q6PCD5 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RFWD3Q6PCD5 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.59■■□□□ 1.05
RFWD3Q6PCD5 NCF1B-203ENST00000435988 1254 ntBASIC21.59■■□□□ 1.05
RFWD3Q6PCD5 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.59■■□□□ 1.05
RFWD3Q6PCD5 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.59■■□□□ 1.05
RFWD3Q6PCD5 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RFWD3Q6PCD5 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.59■■□□□ 1.05
RFWD3Q6PCD5 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.59■■□□□ 1.05
RFWD3Q6PCD5 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.59■■□□□ 1.05
RFWD3Q6PCD5 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RFWD3Q6PCD5 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RFWD3Q6PCD5 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RFWD3Q6PCD5 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
RFWD3Q6PCD5 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RFWD3Q6PCD5 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RFWD3Q6PCD5 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.58■■□□□ 1.05
RFWD3Q6PCD5 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RFWD3Q6PCD5 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RFWD3Q6PCD5 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.58■■□□□ 1.05
RFWD3Q6PCD5 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
RFWD3Q6PCD5 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
RFWD3Q6PCD5 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RFWD3Q6PCD5 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.58■■□□□ 1.05
RFWD3Q6PCD5 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.58■■□□□ 1.05
RFWD3Q6PCD5 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.58■■□□□ 1.05
RFWD3Q6PCD5 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RFWD3Q6PCD5 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RFWD3Q6PCD5 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RFWD3Q6PCD5 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.58■■□□□ 1.04
RFWD3Q6PCD5 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
RFWD3Q6PCD5 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
RFWD3Q6PCD5 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RFWD3Q6PCD5 AC068338.2-201ENST00000563278 1430 ntBASIC21.57■■□□□ 1.04
RFWD3Q6PCD5 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RFWD3Q6PCD5 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
RFWD3Q6PCD5 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RFWD3Q6PCD5 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
RFWD3Q6PCD5 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.57■■□□□ 1.04
RFWD3Q6PCD5 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.57■■□□□ 1.04
RFWD3Q6PCD5 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.57■■□□□ 1.04
RFWD3Q6PCD5 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.57■■□□□ 1.04
RFWD3Q6PCD5 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.57■■□□□ 1.04
RFWD3Q6PCD5 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RFWD3Q6PCD5 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RFWD3Q6PCD5 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RFWD3Q6PCD5 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.57■■□□□ 1.04
RFWD3Q6PCD5 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RFWD3Q6PCD5 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RFWD3Q6PCD5 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.56■■□□□ 1.04
RFWD3Q6PCD5 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.56■■□□□ 1.04
RFWD3Q6PCD5 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.56■■□□□ 1.04
RFWD3Q6PCD5 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RFWD3Q6PCD5 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.56■■□□□ 1.04
RFWD3Q6PCD5 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
RFWD3Q6PCD5 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RFWD3Q6PCD5 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RFWD3Q6PCD5 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
RFWD3Q6PCD5 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RFWD3Q6PCD5 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RFWD3Q6PCD5 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.55■■□□□ 1.04
RFWD3Q6PCD5 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RFWD3Q6PCD5 AC104771.1-201ENST00000603335 964 ntBASIC21.55■■□□□ 1.04
RFWD3Q6PCD5 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
RFWD3Q6PCD5 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
RFWD3Q6PCD5 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RFWD3Q6PCD5 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms