Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.94■□□□□ 0.94
KHDC1Q4VXA5 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.94■□□□□ 0.94
KHDC1Q4VXA5 AC053503.5-201ENST00000601508 636 ntBASIC20.94■□□□□ 0.94
KHDC1Q4VXA5 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
KHDC1Q4VXA5 Z98882.1-201ENST00000622160 2253 ntBASIC20.94■□□□□ 0.94
KHDC1Q4VXA5 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KHDC1Q4VXA5 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
KHDC1Q4VXA5 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
KHDC1Q4VXA5 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
KHDC1Q4VXA5 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
KHDC1Q4VXA5 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
KHDC1Q4VXA5 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.93■□□□□ 0.94
KHDC1Q4VXA5 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.93■□□□□ 0.94
KHDC1Q4VXA5 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
KHDC1Q4VXA5 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.93■□□□□ 0.94
KHDC1Q4VXA5 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
KHDC1Q4VXA5 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.93■□□□□ 0.94
KHDC1Q4VXA5 AC092666.2-201ENST00000613287 246 ntBASIC20.93■□□□□ 0.94
KHDC1Q4VXA5 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
KHDC1Q4VXA5 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
KHDC1Q4VXA5 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
KHDC1Q4VXA5 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.93■□□□□ 0.94
KHDC1Q4VXA5 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
KHDC1Q4VXA5 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.93■□□□□ 0.94
KHDC1Q4VXA5 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
KHDC1Q4VXA5 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.92■□□□□ 0.94
KHDC1Q4VXA5 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KHDC1Q4VXA5 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
KHDC1Q4VXA5 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.92■□□□□ 0.94
KHDC1Q4VXA5 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
KHDC1Q4VXA5 KRT19P1-201ENST00000405746 1186 ntBASIC20.92■□□□□ 0.94
KHDC1Q4VXA5 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.92■□□□□ 0.94
KHDC1Q4VXA5 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
KHDC1Q4VXA5 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.92■□□□□ 0.94
KHDC1Q4VXA5 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.92■□□□□ 0.94
KHDC1Q4VXA5 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.92■□□□□ 0.94
KHDC1Q4VXA5 AC138907.5-202ENST00000569484 235 ntBASIC20.92■□□□□ 0.94
KHDC1Q4VXA5 AP001160.3-201ENST00000601484 763 ntBASIC20.92■□□□□ 0.94
KHDC1Q4VXA5 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
KHDC1Q4VXA5 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
KHDC1Q4VXA5 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
KHDC1Q4VXA5 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KHDC1Q4VXA5 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KHDC1Q4VXA5 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
KHDC1Q4VXA5 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
KHDC1Q4VXA5 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KHDC1Q4VXA5 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
KHDC1Q4VXA5 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.92■□□□□ 0.94
KHDC1Q4VXA5 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.92■□□□□ 0.94
KHDC1Q4VXA5 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KHDC1Q4VXA5 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KHDC1Q4VXA5 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KHDC1Q4VXA5 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
KHDC1Q4VXA5 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KHDC1Q4VXA5 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
KHDC1Q4VXA5 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.91■□□□□ 0.94
KHDC1Q4VXA5 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.91■□□□□ 0.94
KHDC1Q4VXA5 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.91■□□□□ 0.94
KHDC1Q4VXA5 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
KHDC1Q4VXA5 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.91■□□□□ 0.94
KHDC1Q4VXA5 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.91■□□□□ 0.94
KHDC1Q4VXA5 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.91■□□□□ 0.94
KHDC1Q4VXA5 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.91■□□□□ 0.94
KHDC1Q4VXA5 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
KHDC1Q4VXA5 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
KHDC1Q4VXA5 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
KHDC1Q4VXA5 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
KHDC1Q4VXA5 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.91■□□□□ 0.94
KHDC1Q4VXA5 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KHDC1Q4VXA5 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KHDC1Q4VXA5 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
KHDC1Q4VXA5 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
KHDC1Q4VXA5 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
KHDC1Q4VXA5 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KHDC1Q4VXA5 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KHDC1Q4VXA5 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KHDC1Q4VXA5 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KHDC1Q4VXA5 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KHDC1Q4VXA5 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KHDC1Q4VXA5 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KHDC1Q4VXA5 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
KHDC1Q4VXA5 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KHDC1Q4VXA5 AC010141.2-201ENST00000452426 721 ntBASIC20.9■□□□□ 0.94
KHDC1Q4VXA5 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.9■□□□□ 0.94
KHDC1Q4VXA5 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.9■□□□□ 0.94
KHDC1Q4VXA5 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
KHDC1Q4VXA5 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KHDC1Q4VXA5 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
KHDC1Q4VXA5 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
KHDC1Q4VXA5 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
KHDC1Q4VXA5 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
KHDC1Q4VXA5 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
KHDC1Q4VXA5 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
KHDC1Q4VXA5 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
KHDC1Q4VXA5 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.89■□□□□ 0.94
KHDC1Q4VXA5 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KHDC1Q4VXA5 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.89■□□□□ 0.93
KHDC1Q4VXA5 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.89■□□□□ 0.93
KHDC1Q4VXA5 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
KHDC1Q4VXA5 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms