Protein–RNA interactions for Protein: Q4G0I0

CCSMST1, Protein CCSMST1, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSMST1Q4G0I0 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCSMST1Q4G0I0 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCSMST1Q4G0I0 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCSMST1Q4G0I0 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCSMST1Q4G0I0 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCSMST1Q4G0I0 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.17■□□□□ 0.82
CCSMST1Q4G0I0 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.17■□□□□ 0.82
CCSMST1Q4G0I0 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.17■□□□□ 0.82
CCSMST1Q4G0I0 AC243732.1-201ENST00000612648 864 ntBASIC20.17■□□□□ 0.82
CCSMST1Q4G0I0 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.17■□□□□ 0.82
CCSMST1Q4G0I0 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCSMST1Q4G0I0 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCSMST1Q4G0I0 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCSMST1Q4G0I0 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.16■□□□□ 0.82
CCSMST1Q4G0I0 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CCSMST1Q4G0I0 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCSMST1Q4G0I0 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.16■□□□□ 0.82
CCSMST1Q4G0I0 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCSMST1Q4G0I0 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.16■□□□□ 0.82
CCSMST1Q4G0I0 CNN2P6-201ENST00000439038 900 ntBASIC20.16■□□□□ 0.82
CCSMST1Q4G0I0 AC080038.1-201ENST00000611274 1154 ntBASIC20.16■□□□□ 0.82
CCSMST1Q4G0I0 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.16■□□□□ 0.82
CCSMST1Q4G0I0 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCSMST1Q4G0I0 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCSMST1Q4G0I0 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCSMST1Q4G0I0 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCSMST1Q4G0I0 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCSMST1Q4G0I0 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCSMST1Q4G0I0 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.16■□□□□ 0.82
CCSMST1Q4G0I0 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.16■□□□□ 0.82
CCSMST1Q4G0I0 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CCSMST1Q4G0I0 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCSMST1Q4G0I0 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCSMST1Q4G0I0 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.15■□□□□ 0.82
CCSMST1Q4G0I0 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCSMST1Q4G0I0 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
CCSMST1Q4G0I0 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.15■□□□□ 0.82
CCSMST1Q4G0I0 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.15■□□□□ 0.82
CCSMST1Q4G0I0 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.15■□□□□ 0.82
CCSMST1Q4G0I0 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCSMST1Q4G0I0 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.15■□□□□ 0.82
CCSMST1Q4G0I0 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCSMST1Q4G0I0 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCSMST1Q4G0I0 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCSMST1Q4G0I0 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCSMST1Q4G0I0 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
CCSMST1Q4G0I0 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCSMST1Q4G0I0 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCSMST1Q4G0I0 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCSMST1Q4G0I0 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCSMST1Q4G0I0 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
CCSMST1Q4G0I0 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
CCSMST1Q4G0I0 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
CCSMST1Q4G0I0 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.14■□□□□ 0.81
CCSMST1Q4G0I0 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCSMST1Q4G0I0 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.14■□□□□ 0.81
CCSMST1Q4G0I0 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.14■□□□□ 0.81
CCSMST1Q4G0I0 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
CCSMST1Q4G0I0 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
CCSMST1Q4G0I0 AC121338.2-201ENST00000622535 1744 ntBASIC20.14■□□□□ 0.81
CCSMST1Q4G0I0 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCSMST1Q4G0I0 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.14■□□□□ 0.81
CCSMST1Q4G0I0 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.14■□□□□ 0.81
CCSMST1Q4G0I0 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CCSMST1Q4G0I0 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.14■□□□□ 0.81
CCSMST1Q4G0I0 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CCSMST1Q4G0I0 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.14■□□□□ 0.81
CCSMST1Q4G0I0 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CCSMST1Q4G0I0 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.14■□□□□ 0.81
CCSMST1Q4G0I0 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCSMST1Q4G0I0 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCSMST1Q4G0I0 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CCSMST1Q4G0I0 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CCSMST1Q4G0I0 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.13■□□□□ 0.81
CCSMST1Q4G0I0 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCSMST1Q4G0I0 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCSMST1Q4G0I0 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCSMST1Q4G0I0 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.13■□□□□ 0.81
CCSMST1Q4G0I0 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCSMST1Q4G0I0 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CCSMST1Q4G0I0 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCSMST1Q4G0I0 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CCSMST1Q4G0I0 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.13■□□□□ 0.81
CCSMST1Q4G0I0 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
CCSMST1Q4G0I0 AC073111.5-205ENST00000641717 521 ntBASIC20.13■□□□□ 0.81
CCSMST1Q4G0I0 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCSMST1Q4G0I0 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCSMST1Q4G0I0 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCSMST1Q4G0I0 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.12■□□□□ 0.81
CCSMST1Q4G0I0 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.12■□□□□ 0.81
CCSMST1Q4G0I0 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.12■□□□□ 0.81
CCSMST1Q4G0I0 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
CCSMST1Q4G0I0 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCSMST1Q4G0I0 CDCA4P2-201ENST00000441182 718 ntBASIC20.12■□□□□ 0.81
CCSMST1Q4G0I0 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.12■□□□□ 0.81
CCSMST1Q4G0I0 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
CCSMST1Q4G0I0 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.12■□□□□ 0.81
CCSMST1Q4G0I0 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCSMST1Q4G0I0 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCSMST1Q4G0I0 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 9.9 ms