Protein–RNA interactions for Protein: Q15428

SF3A2, Splicing factor 3A subunit 2, humanhuman

Known RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2Q15428 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
SF3A2Q15428 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
SF3A2Q15428 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SF3A2Q15428 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.57■□□□□ 0.88
SF3A2Q15428 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SF3A2Q15428 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SF3A2Q15428 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
SF3A2Q15428 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SF3A2Q15428 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.56■□□□□ 0.88
SF3A2Q15428 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
SF3A2Q15428 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SF3A2Q15428 ANOS2P-203ENST00000472227 1816 ntBASIC20.56■□□□□ 0.88
SF3A2Q15428 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SF3A2Q15428 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SF3A2Q15428 TSPY15P-201ENST00000457163 923 ntBASIC20.56■□□□□ 0.88
SF3A2Q15428 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SF3A2Q15428 AC100791.3-201ENST00000617619 330 ntBASIC20.56■□□□□ 0.88
SF3A2Q15428 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SF3A2Q15428 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SF3A2Q15428 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
SF3A2Q15428 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.56■□□□□ 0.88
SF3A2Q15428 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
SF3A2Q15428 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SF3A2Q15428 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SF3A2Q15428 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SF3A2Q15428 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SF3A2Q15428 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.55■□□□□ 0.88
SF3A2Q15428 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC20.55■□□□□ 0.88
SF3A2Q15428 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.55■□□□□ 0.88
SF3A2Q15428 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.55■□□□□ 0.88
SF3A2Q15428 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.55■□□□□ 0.88
SF3A2Q15428 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
SF3A2Q15428 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.55■□□□□ 0.88
SF3A2Q15428 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.55■□□□□ 0.88
SF3A2Q15428 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SF3A2Q15428 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.55■□□□□ 0.88
SF3A2Q15428 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
SF3A2Q15428 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SF3A2Q15428 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SF3A2Q15428 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SF3A2Q15428 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SF3A2Q15428 RCN1P1-201ENST00000400413 996 ntBASIC20.54■□□□□ 0.88
SF3A2Q15428 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC20.54■□□□□ 0.88
SF3A2Q15428 AC087499.1-201ENST00000418141 1075 ntBASIC20.54■□□□□ 0.88
SF3A2Q15428 AC091799.1-201ENST00000422823 811 ntBASIC20.54■□□□□ 0.88
SF3A2Q15428 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.54■□□□□ 0.88
SF3A2Q15428 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.54■□□□□ 0.88
SF3A2Q15428 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.54■□□□□ 0.88
SF3A2Q15428 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
SF3A2Q15428 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SF3A2Q15428 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SF3A2Q15428 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SF3A2Q15428 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SF3A2Q15428 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.53■□□□□ 0.88
SF3A2Q15428 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SF3A2Q15428 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
SF3A2Q15428 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.53■□□□□ 0.88
SF3A2Q15428 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SF3A2Q15428 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SF3A2Q15428 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SF3A2Q15428 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SF3A2Q15428 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.53■□□□□ 0.88
SF3A2Q15428 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.53■□□□□ 0.88
SF3A2Q15428 AL445228.2-201ENST00000605589 952 ntBASIC20.53■□□□□ 0.88
SF3A2Q15428 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SF3A2Q15428 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SF3A2Q15428 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SF3A2Q15428 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.52■□□□□ 0.88
SF3A2Q15428 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
SF3A2Q15428 MCRIP2P1-201ENST00000394346 511 ntBASIC20.52■□□□□ 0.88
SF3A2Q15428 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.52■□□□□ 0.88
SF3A2Q15428 POM121L13P-201ENST00000422362 380 ntBASIC20.52■□□□□ 0.88
SF3A2Q15428 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
SF3A2Q15428 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.52■□□□□ 0.88
SF3A2Q15428 CDV3P1-201ENST00000471403 739 ntBASIC20.52■□□□□ 0.88
SF3A2Q15428 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SF3A2Q15428 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
SF3A2Q15428 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
SF3A2Q15428 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
SF3A2Q15428 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SF3A2Q15428 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.52■□□□□ 0.87
SF3A2Q15428 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SF3A2Q15428 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SF3A2Q15428 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SF3A2Q15428 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.51■□□□□ 0.87
SF3A2Q15428 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SF3A2Q15428 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SF3A2Q15428 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SF3A2Q15428 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
SF3A2Q15428 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SF3A2Q15428 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SF3A2Q15428 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SF3A2Q15428 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SF3A2Q15428 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
SF3A2Q15428 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.51■□□□□ 0.87
SF3A2Q15428 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.51■□□□□ 0.87
SF3A2Q15428 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.51■□□□□ 0.87
SF3A2Q15428 AL049637.2-201ENST00000641778 930 ntBASIC20.51■□□□□ 0.87
SF3A2Q15428 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
SF3A2Q15428 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms