Protein–RNA interactions for Protein: Q04781

RKR1, E3 ubiquitin-protein ligase listerin, yeastyeast

Predictions only

Length 1,562 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RKR1Q04781 MRPL44YMR225C 297 nt1.52□□□□□ -2.17
RKR1Q04781 SCP1YOR367W 603 nt1.52□□□□□ -2.17
RKR1Q04781 TFA1YKL028W 1449 nt1.52□□□□□ -2.17
RKR1Q04781 POM152YMR129W 4014 nt1.52□□□□□ -2.17
RKR1Q04781 EAF1YDR359C 2949 nt1.52□□□□□ -2.17
RKR1Q04781 MLP2YIL149C 5040 nt1.52□□□□□ -2.17
RKR1Q04781 CCM1YGR150C 2595 nt1.52□□□□□ -2.17
RKR1Q04781 VMA10YHR039C-A 345 nt1.51□□□□□ -2.17
RKR1Q04781 PIG2YIL045W 1617 nt1.51□□□□□ -2.17
RKR1Q04781 IQG1YPL242C 4488 nt1.51□□□□□ -2.17
RKR1Q04781 ATG32YIL146C 1590 nt1.51□□□□□ -2.17
RKR1Q04781 TIM9YEL020W-A 264 nt1.51□□□□□ -2.17
RKR1Q04781 CGR1YGL029W 363 nt1.51□□□□□ -2.17
RKR1Q04781 RPN8YOR261C 1017 nt1.51□□□□□ -2.17
RKR1Q04781 YLR345WYLR345W 1530 nt1.5□□□□□ -2.17
RKR1Q04781 RIT1YMR283C 1542 nt1.5□□□□□ -2.17
RKR1Q04781 DSS1YMR287C 2910 nt1.5□□□□□ -2.17
RKR1Q04781 CDC39YCR093W 6327 nt1.5□□□□□ -2.17
RKR1Q04781 YGR160WYGR160W 612 nt1.5□□□□□ -2.17
RKR1Q04781 YNL203CYNL203C 612 nt1.5□□□□□ -2.17
RKR1Q04781 HSP10YOR020C 321 nt1.5□□□□□ -2.17
RKR1Q04781 SYO1YDL063C 1863 nt1.5□□□□□ -2.17
RKR1Q04781 NOP56YLR197W 1515 nt1.5□□□□□ -2.17
RKR1Q04781 BAS1YKR099W 2436 nt1.49□□□□□ -2.17
RKR1Q04781 WIP1YDR374W-A 270 nt1.49□□□□□ -2.17
RKR1Q04781 YLR050CYLR050C 486 nt1.49□□□□□ -2.17
RKR1Q04781 NEM1YHR004C 1341 nt1.49□□□□□ -2.17
RKR1Q04781 TOM70YNL121C 1854 nt1.49□□□□□ -2.17
RKR1Q04781 YMR1YJR110W 2067 nt1.48□□□□□ -2.17
RKR1Q04781 YKL070WYKL070W 510 nt1.48□□□□□ -2.17
RKR1Q04781 ERP1YAR002C-A 660 nt1.48□□□□□ -2.17
RKR1Q04781 DIA1YMR316W 1011 nt1.48□□□□□ -2.17
RKR1Q04781 SCC2YDR180W 4482 nt1.48□□□□□ -2.17
RKR1Q04781 YCR050CYCR050C 309 nt1.47□□□□□ -2.17
RKR1Q04781 YAL042C-AYAL042C-A 378 nt1.47□□□□□ -2.17
RKR1Q04781 YNL046WYNL046W 519 nt1.47□□□□□ -2.17
RKR1Q04781 YOR019WYOR019W 2193 nt1.47□□□□□ -2.17
RKR1Q04781 CTM1YHR109W 1758 nt1.47□□□□□ -2.17
RKR1Q04781 COS6YGR295C 1146 nt1.46□□□□□ -2.18
RKR1Q04781 ARC18YLR370C 537 nt1.46□□□□□ -2.18
RKR1Q04781 SPH1YLR313C 1593 nt1.45□□□□□ -2.18
RKR1Q04781 MNT3YIL014W 1893 nt1.45□□□□□ -2.18
RKR1Q04781 FRK1YPL141C 2598 nt1.45□□□□□ -2.18
RKR1Q04781 APL3YBL037W 3078 nt1.45□□□□□ -2.18
RKR1Q04781 TAH1YCR060W 336 nt1.45□□□□□ -2.18
RKR1Q04781 RNH70YGR276C 1662 nt1.45□□□□□ -2.18
RKR1Q04781 BUL2YML111W 2763 nt1.45□□□□□ -2.18
RKR1Q04781 YCR081C-AYCR081C-A 237 nt1.44□□□□□ -2.18
RKR1Q04781 YPS5YGL259W 498 nt1.44□□□□□ -2.18
RKR1Q04781 COS5YJR161C 1152 nt1.44□□□□□ -2.18
RKR1Q04781 SFG1YOR315W 1041 nt1.44□□□□□ -2.18
RKR1Q04781 ISW2YOR304W 3363 nt1.44□□□□□ -2.18
RKR1Q04781 LST4YKL176C 2487 nt1.43□□□□□ -2.18
RKR1Q04781 YIL059CYIL059C 366 nt1.43□□□□□ -2.18
RKR1Q04781 COS1YNL336W 1146 nt1.43□□□□□ -2.18
RKR1Q04781 THO2YNL139C 4794 nt1.43□□□□□ -2.18
RKR1Q04781 YDR341CYDR341C 1824 nt1.43□□□□□ -2.18
RKR1Q04781 BUR6YER159C 429 nt1.42□□□□□ -2.18
RKR1Q04781 YHI9YHR029C 885 nt1.42□□□□□ -2.18
RKR1Q04781 BUD19YJL188C 309 nt1.42□□□□□ -2.18
RKR1Q04781 CHC1YGL206C 4962 nt1.42□□□□□ -2.18
RKR1Q04781 COX13YGL191W 390 nt1.42□□□□□ -2.18
RKR1Q04781 YGR283CYGR283C 1026 nt1.42□□□□□ -2.18
RKR1Q04781 YHL044WYHL044W 708 nt1.42□□□□□ -2.18
RKR1Q04781 SSP2YOR242C 1116 nt1.42□□□□□ -2.18
RKR1Q04781 PGD1YGL025C 1194 nt1.41□□□□□ -2.18
RKR1Q04781 UBC7YMR022W 498 nt1.41□□□□□ -2.18
RKR1Q04781 CNM67YNL225C 1746 nt1.41□□□□□ -2.18
RKR1Q04781 PEX14YGL153W 1026 nt1.4□□□□□ -2.19
RKR1Q04781 AIM18YHR198C 966 nt1.4□□□□□ -2.19
RKR1Q04781 CDC27YBL084C 2277 nt1.4□□□□□ -2.19
RKR1Q04781 FMP27YLR454W 7887 nt1.4□□□□□ -2.19
RKR1Q04781 NDC80YIL144W 2076 nt1.39□□□□□ -2.19
RKR1Q04781 TPK3YKL166C 1197 nt1.39□□□□□ -2.19
RKR1Q04781 YBR013CYBR013C 390 nt1.39□□□□□ -2.19
RKR1Q04781 BRE5YNR051C 1548 nt1.39□□□□□ -2.19
RKR1Q04781 RAD18YCR066W 1464 nt1.39□□□□□ -2.19
RKR1Q04781 PCL5YHR071W 690 nt1.38□□□□□ -2.19
RKR1Q04781 RPL34BYIL052C 366 nt1.38□□□□□ -2.19
RKR1Q04781 YKL145W-AYKL145W-A 93 nt1.38□□□□□ -2.19
RKR1Q04781 ERP4YOR016C 624 nt1.38□□□□□ -2.19
RKR1Q04781 CIK1YMR198W 1785 nt1.38□□□□□ -2.19
RKR1Q04781 NUP145YGL092W 3954 nt1.38□□□□□ -2.19
RKR1Q04781 CTK1YKL139W 1587 nt1.38□□□□□ -2.19
RKR1Q04781 snR3snR3 194 nt1.38□□□□□ -2.19
RKR1Q04781 RGP1YDR137W 1992 nt1.37□□□□□ -2.19
RKR1Q04781 STP1YDR463W 1560 nt1.36□□□□□ -2.19
RKR1Q04781 YCL068CYCL068C 783 nt1.36□□□□□ -2.19
RKR1Q04781 DAS2YDR020C 699 nt1.36□□□□□ -2.19
RKR1Q04781 TMA7YLR262C-A 195 nt1.36□□□□□ -2.19
RKR1Q04781 YML009C-AYML009C-A 327 nt1.36□□□□□ -2.19
RKR1Q04781 INP1YMR204C 1263 nt1.36□□□□□ -2.19
RKR1Q04781 YBL083CYBL083C 426 nt1.36□□□□□ -2.19
RKR1Q04781 SNF5YBR289W 2718 nt1.35□□□□□ -2.19
RKR1Q04781 ARF1YDL192W 546 nt1.35□□□□□ -2.19
RKR1Q04781 YGL165CYGL165C 579 nt1.35□□□□□ -2.19
RKR1Q04781 YGL262WYGL262W 528 nt1.34□□□□□ -2.19
RKR1Q04781 RLP24YLR009W 600 nt1.34□□□□□ -2.19
RKR1Q04781 YPK3YBR028C 1578 nt1.34□□□□□ -2.19
RKR1Q04781 TRS65YGR166W 1683 nt1.34□□□□□ -2.19
Retrieved 100 of 7,029 protein–RNA pairs in 18.1 ms