Protein–RNA interactions for Protein: Q01080

RPA49, DNA-directed RNA polymerase I subunit RPA49, yeastyeast

Predicted RBP Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPA49Q01080 CAF120YNL278W 3183 nt2.86□□□□□ -1.95
RPA49Q01080 SHS1YDL225W 1656 nt2.86□□□□□ -1.95
RPA49Q01080 PCK1YKR097W 1650 nt2.86□□□□□ -1.95
RPA49Q01080 RPS22AYJL190C 393 nt2.86□□□□□ -1.95
RPA49Q01080 YET1YKL065C 621 nt2.86□□□□□ -1.95
RPA49Q01080 TDA8YAL064C-A 381 nt2.86□□□□□ -1.95
RPA49Q01080 YOL107WYOL107W 1029 nt2.86□□□□□ -1.95
RPA49Q01080 snR189snR189 189 nt2.86□□□□□ -1.95
RPA49Q01080 YCT1YLL055W 1596 nt2.86□□□□□ -1.95
RPA49Q01080 YEL1YBL060W 2064 nt2.86□□□□□ -1.95
RPA49Q01080 ESC2YDR363W 1371 nt2.86□□□□□ -1.95
RPA49Q01080 TMA64YDR117C 1698 nt2.85□□□□□ -1.95
RPA49Q01080 YLR108CYLR108C 1458 nt2.85□□□□□ -1.95
RPA49Q01080 YDR042CYDR042C 603 nt2.85□□□□□ -1.95
RPA49Q01080 YFR009W-AYFR009W-A 258 nt2.85□□□□□ -1.95
RPA49Q01080 YIL174WYIL174W 228 nt2.85□□□□□ -1.95
RPA49Q01080 YJL147CYJL147C 1149 nt2.85□□□□□ -1.95
RPA49Q01080 ASG7YJL170C 630 nt2.85□□□□□ -1.95
RPA49Q01080 RPL17BYJL177W 555 nt2.85□□□□□ -1.95
RPA49Q01080 YJL222W-AYJL222W-A 228 nt2.85□□□□□ -1.95
RPA49Q01080 UNG1YML021C 1080 nt2.85□□□□□ -1.95
RPA49Q01080 INP1YMR204C 1263 nt2.85□□□□□ -1.95
RPA49Q01080 HEM4YOR278W 828 nt2.85□□□□□ -1.95
RPA49Q01080 PSY2YNL201C 2577 nt2.85□□□□□ -1.95
RPA49Q01080 IKI3YLR384C 4050 nt2.84□□□□□ -1.95
RPA49Q01080 RSE1YML049C 4086 nt2.84□□□□□ -1.95
RPA49Q01080 CDC55YGL190C 1581 nt2.84□□□□□ -1.95
RPA49Q01080 ESL1YIL151C 3357 nt2.84□□□□□ -1.95
RPA49Q01080 PUF6YDR496C 1971 nt2.84□□□□□ -1.95
RPA49Q01080 DAD1YDR016C 285 nt2.84□□□□□ -1.95
RPA49Q01080 RSM18YER050C 417 nt2.84□□□□□ -1.95
RPA49Q01080 BAT1YHR208W 1182 nt2.84□□□□□ -1.95
RPA49Q01080 RNR2YJL026W 1200 nt2.84□□□□□ -1.95
RPA49Q01080 YKL123WYKL123W 381 nt2.84□□□□□ -1.95
RPA49Q01080 AXL1YPR122W 3627 nt2.84□□□□□ -1.96
RPA49Q01080 SEC26YDR238C 2922 nt2.84□□□□□ -1.96
RPA49Q01080 RRM3YHR031C 2172 nt2.84□□□□□ -1.96
RPA49Q01080 SEN54YPL083C 1404 nt2.84□□□□□ -1.96
RPA49Q01080 KAR9YPL269W 1935 nt2.83□□□□□ -1.96
RPA49Q01080 REF2YDR195W 1602 nt2.83□□□□□ -1.96
RPA49Q01080 YOL057WYOL057W 2136 nt2.83□□□□□ -1.96
RPA49Q01080 SSP1YHR184W 1716 nt2.83□□□□□ -1.96
RPA49Q01080 RGR1YLR071C 3249 nt2.83□□□□□ -1.96
RPA49Q01080 KAP104YBR017C 2757 nt2.83□□□□□ -1.96
RPA49Q01080 MIX14YDR031W 366 nt2.83□□□□□ -1.96
RPA49Q01080 MND1YGL183C 660 nt2.83□□□□□ -1.96
RPA49Q01080 YGR109W-AYGR109W-A 873 nt2.83□□□□□ -1.96
RPA49Q01080 YHR214C-DYHR214C-D 294 nt2.83□□□□□ -1.96
RPA49Q01080 YIL012WYIL012W 342 nt2.83□□□□□ -1.96
RPA49Q01080 YIL082WYIL082W 873 nt2.83□□□□□ -1.96
RPA49Q01080 YIR036W-AYIR036W-A 402 nt2.83□□□□□ -1.96
RPA49Q01080 YKL091CYKL091C 933 nt2.83□□□□□ -1.96
RPA49Q01080 YAR069CYAR069C 294 nt2.83□□□□□ -1.96
RPA49Q01080 YPL276WYPL276W 438 nt2.83□□□□□ -1.96
RPA49Q01080 TOM1YDR457W 9807 nt2.83□□□□□ -1.96
RPA49Q01080 SRC1YML034W 2505 nt2.83□□□□□ -1.96
RPA49Q01080 ALY1YKR021W 2748 nt2.83□□□□□ -1.96
RPA49Q01080 RPO41YFL036W 4056 nt2.83□□□□□ -1.96
RPA49Q01080 ESL2YKR096W 3588 nt2.82□□□□□ -1.96
RPA49Q01080 MET6YER091C 2304 nt2.82□□□□□ -1.96
RPA49Q01080 TAO3YIL129C 7131 nt2.82□□□□□ -1.96
RPA49Q01080 YER107W-AYER107W-A 321 nt2.82□□□□□ -1.96
RPA49Q01080 YIL054WYIL054W 318 nt2.82□□□□□ -1.96
RPA49Q01080 YIR020C-BYIR020C-B 735 nt2.82□□□□□ -1.96
RPA49Q01080 CPR7YJR032W 1182 nt2.82□□□□□ -1.96
RPA49Q01080 CWC24YLR323C 780 nt2.82□□□□□ -1.96
RPA49Q01080 GIM3YNL153C 390 nt2.82□□□□□ -1.96
RPA49Q01080 SFM1YOR021C 642 nt2.82□□□□□ -1.96
RPA49Q01080 BUD21YOR078W 645 nt2.82□□□□□ -1.96
RPA49Q01080 YOR152CYOR152C 771 nt2.82□□□□□ -1.96
RPA49Q01080 YBR051WYBR051W 351 nt2.82□□□□□ -1.96
RPA49Q01080 AYT1YLL063C 1425 nt2.82□□□□□ -1.96
RPA49Q01080 SCY1YGL083W 2415 nt2.82□□□□□ -1.96
RPA49Q01080 NAB3YPL190C 2409 nt2.82□□□□□ -1.96
RPA49Q01080 ADY4YLR227C 1482 nt2.82□□□□□ -1.96
RPA49Q01080 CDC20YGL116W 1833 nt2.82□□□□□ -1.96
RPA49Q01080 RTT10YPL183C 3042 nt2.81□□□□□ -1.96
RPA49Q01080 CYR1YJL005W 6081 nt2.81□□□□□ -1.96
RPA49Q01080 YPR1YDR368W 939 nt2.81□□□□□ -1.96
RPA49Q01080 YIP5YGL161C 933 nt2.81□□□□□ -1.96
RPA49Q01080 RPL14BYHL001W 417 nt2.81□□□□□ -1.96
RPA49Q01080 MES1YGR264C 2256 nt2.8□□□□□ -1.96
RPA49Q01080 YFL012W-AYFL012W-A 375 nt2.8□□□□□ -1.96
RPA49Q01080 PNC1YGL037C 651 nt2.8□□□□□ -1.96
RPA49Q01080 MST27YGL051W 705 nt2.8□□□□□ -1.96
RPA49Q01080 YGR053CYGR053C 852 nt2.8□□□□□ -1.96
RPA49Q01080 AIM18YHR198C 966 nt2.8□□□□□ -1.96
RPA49Q01080 YHR213WYHR213W 597 nt2.8□□□□□ -1.96
RPA49Q01080 tW(CCA)G1tW(CCA)G1 72 nt2.8□□□□□ -1.96
RPA49Q01080 tW(CCA)G2tW(CCA)G2 72 nt2.8□□□□□ -1.96
RPA49Q01080 tW(CCA)JtW(CCA)J 72 nt2.8□□□□□ -1.96
RPA49Q01080 tW(CCA)KtW(CCA)K 72 nt2.8□□□□□ -1.96
RPA49Q01080 tW(CCA)MtW(CCA)M 72 nt2.8□□□□□ -1.96
RPA49Q01080 tW(CCA)PtW(CCA)P 72 nt2.8□□□□□ -1.96
RPA49Q01080 ECM9YKR004C 1134 nt2.8□□□□□ -1.96
RPA49Q01080 YAR062WYAR062W 597 nt2.8□□□□□ -1.96
RPA49Q01080 COX8YLR395C 237 nt2.8□□□□□ -1.96
RPA49Q01080 YOL029CYOL029C 606 nt2.8□□□□□ -1.96
RPA49Q01080 SGT1YOR057W 1188 nt2.8□□□□□ -1.96
RPA49Q01080 RRD2YPL152W 1077 nt2.8□□□□□ -1.96
Retrieved 100 of 7,029 protein–RNA pairs in 146.1 ms