Protein–RNA interactions for Protein: P62820

RAB1A, Ras-related protein Rab-1A, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1AP62820 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.21■□□□□ 0.5
RAB1AP62820 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
RAB1AP62820 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAB1AP62820 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAB1AP62820 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.2■□□□□ 0.5
RAB1AP62820 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
RAB1AP62820 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.2■□□□□ 0.5
RAB1AP62820 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RAB1AP62820 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RAB1AP62820 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.2■□□□□ 0.5
RAB1AP62820 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.2■□□□□ 0.5
RAB1AP62820 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAB1AP62820 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
RAB1AP62820 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
RAB1AP62820 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAB1AP62820 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAB1AP62820 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
RAB1AP62820 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB1AP62820 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB1AP62820 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.19■□□□□ 0.5
RAB1AP62820 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
RAB1AP62820 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RAB1AP62820 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB1AP62820 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
RAB1AP62820 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.19■□□□□ 0.5
RAB1AP62820 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RAB1AP62820 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.19■□□□□ 0.5
RAB1AP62820 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.19■□□□□ 0.5
RAB1AP62820 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.19■□□□□ 0.5
RAB1AP62820 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.19■□□□□ 0.5
RAB1AP62820 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB1AP62820 AC011767.1-201ENST00000617410 1153 ntBASIC18.19■□□□□ 0.5
RAB1AP62820 BID-214ENST00000617586 542 ntTSL 5 BASIC18.19■□□□□ 0.5
RAB1AP62820 AC092437.1-201ENST00000624794 1048 ntBASIC18.19■□□□□ 0.5
RAB1AP62820 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.19■□□□□ 0.5
RAB1AP62820 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RAB1AP62820 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
RAB1AP62820 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB1AP62820 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB1AP62820 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB1AP62820 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB1AP62820 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB1AP62820 AC004911.1-201ENST00000416316 871 ntBASIC18.18■□□□□ 0.5
RAB1AP62820 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.18■□□□□ 0.5
RAB1AP62820 AC245052.3-201ENST00000450182 901 ntBASIC18.18■□□□□ 0.5
RAB1AP62820 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.18■□□□□ 0.5
RAB1AP62820 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
RAB1AP62820 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.18■□□□□ 0.5
RAB1AP62820 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
RAB1AP62820 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB1AP62820 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.18■□□□□ 0.5
RAB1AP62820 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB1AP62820 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB1AP62820 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
RAB1AP62820 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RAB1AP62820 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.18■□□□□ 0.5
RAB1AP62820 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB1AP62820 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB1AP62820 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.17■□□□□ 0.5
RAB1AP62820 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB1AP62820 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB1AP62820 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB1AP62820 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.17■□□□□ 0.5
RAB1AP62820 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB1AP62820 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB1AP62820 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.17■□□□□ 0.5
RAB1AP62820 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB1AP62820 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.17■□□□□ 0.5
RAB1AP62820 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
RAB1AP62820 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB1AP62820 AF106564.1-201ENST00000607058 2553 ntBASIC18.17■□□□□ 0.5
RAB1AP62820 AL137060.1-201ENST00000618151 2648 ntBASIC18.17■□□□□ 0.5
RAB1AP62820 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RAB1AP62820 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB1AP62820 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB1AP62820 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB1AP62820 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB1AP62820 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.16■□□□□ 0.5
RAB1AP62820 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
RAB1AP62820 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RAB1AP62820 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RAB1AP62820 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.16■□□□□ 0.5
RAB1AP62820 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.16■□□□□ 0.5
RAB1AP62820 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.16■□□□□ 0.5
RAB1AP62820 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.16■□□□□ 0.5
RAB1AP62820 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.16■□□□□ 0.5
RAB1AP62820 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.16■□□□□ 0.5
RAB1AP62820 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.16■□□□□ 0.5
RAB1AP62820 MFSD11-216ENST00000590393 1141 ntBASIC18.16■□□□□ 0.5
RAB1AP62820 AC010536.3-201ENST00000620306 533 ntBASIC18.16■□□□□ 0.5
RAB1AP62820 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.16■□□□□ 0.5
RAB1AP62820 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.16■□□□□ 0.5
RAB1AP62820 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RAB1AP62820 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.16■□□□□ 0.5
RAB1AP62820 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
RAB1AP62820 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB1AP62820 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RAB1AP62820 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
RAB1AP62820 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB1AP62820 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms