Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
AP1S2P56377 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
AP1S2P56377 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
AP1S2P56377 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
AP1S2P56377 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.16■□□□□ 0.82
AP1S2P56377 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
AP1S2P56377 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
AP1S2P56377 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.16■□□□□ 0.82
AP1S2P56377 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
AP1S2P56377 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.16■□□□□ 0.82
AP1S2P56377 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
AP1S2P56377 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
AP1S2P56377 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
AP1S2P56377 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.16■□□□□ 0.82
AP1S2P56377 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.16■□□□□ 0.82
AP1S2P56377 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.16■□□□□ 0.82
AP1S2P56377 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.16■□□□□ 0.82
AP1S2P56377 UBE2DNL-204ENST00000602536 740 ntBASIC20.16■□□□□ 0.82
AP1S2P56377 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.16■□□□□ 0.82
AP1S2P56377 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.16■□□□□ 0.82
AP1S2P56377 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
AP1S2P56377 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
AP1S2P56377 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
AP1S2P56377 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
AP1S2P56377 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
AP1S2P56377 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
AP1S2P56377 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
AP1S2P56377 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
AP1S2P56377 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
AP1S2P56377 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
AP1S2P56377 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
AP1S2P56377 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
AP1S2P56377 KRT18P11-201ENST00000435214 1283 ntBASIC20.15■□□□□ 0.82
AP1S2P56377 KRT18P5-201ENST00000436075 1291 ntBASIC20.15■□□□□ 0.82
AP1S2P56377 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
AP1S2P56377 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.15■□□□□ 0.82
AP1S2P56377 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.15■□□□□ 0.82
AP1S2P56377 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
AP1S2P56377 MIR5787-201ENST00000611784 55 ntBASIC20.15■□□□□ 0.82
AP1S2P56377 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.15■□□□□ 0.82
AP1S2P56377 MYCNOS-205ENST00000641950 531 ntBASIC20.15■□□□□ 0.82
AP1S2P56377 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.15■□□□□ 0.82
AP1S2P56377 RBM17P2-201ENST00000616397 1405 ntBASIC20.15■□□□□ 0.82
AP1S2P56377 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
AP1S2P56377 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
AP1S2P56377 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.15■□□□□ 0.82
AP1S2P56377 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.15■□□□□ 0.82
AP1S2P56377 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
AP1S2P56377 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
AP1S2P56377 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
AP1S2P56377 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
AP1S2P56377 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
AP1S2P56377 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
AP1S2P56377 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
AP1S2P56377 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
AP1S2P56377 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
AP1S2P56377 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
AP1S2P56377 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.14■□□□□ 0.81
AP1S2P56377 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.14■□□□□ 0.81
AP1S2P56377 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.14■□□□□ 0.81
AP1S2P56377 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
AP1S2P56377 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
AP1S2P56377 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.14■□□□□ 0.81
AP1S2P56377 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.14■□□□□ 0.81
AP1S2P56377 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
AP1S2P56377 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.14■□□□□ 0.81
AP1S2P56377 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
AP1S2P56377 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
AP1S2P56377 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
AP1S2P56377 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
AP1S2P56377 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.13■□□□□ 0.81
AP1S2P56377 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.13■□□□□ 0.81
AP1S2P56377 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
AP1S2P56377 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
AP1S2P56377 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
AP1S2P56377 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
AP1S2P56377 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.13■□□□□ 0.81
AP1S2P56377 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.13■□□□□ 0.81
AP1S2P56377 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
AP1S2P56377 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
AP1S2P56377 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
AP1S2P56377 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.13■□□□□ 0.81
AP1S2P56377 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
AP1S2P56377 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
AP1S2P56377 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.13■□□□□ 0.81
AP1S2P56377 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.13■□□□□ 0.81
AP1S2P56377 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.13■□□□□ 0.81
AP1S2P56377 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
AP1S2P56377 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.13■□□□□ 0.81
AP1S2P56377 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.13■□□□□ 0.81
AP1S2P56377 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
AP1S2P56377 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
AP1S2P56377 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
AP1S2P56377 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
AP1S2P56377 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
AP1S2P56377 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
AP1S2P56377 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
AP1S2P56377 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
AP1S2P56377 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
AP1S2P56377 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms