Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 OR10C1-204ENST00000622521 1039 ntBASIC19.47■□□□□ 0.71
EFNA3P52797 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
EFNA3P52797 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
EFNA3P52797 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.47■□□□□ 0.71
EFNA3P52797 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.47■□□□□ 0.71
EFNA3P52797 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.47■□□□□ 0.71
EFNA3P52797 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
EFNA3P52797 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
EFNA3P52797 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
EFNA3P52797 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
EFNA3P52797 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
EFNA3P52797 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
EFNA3P52797 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
EFNA3P52797 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
EFNA3P52797 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.46■□□□□ 0.71
EFNA3P52797 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
EFNA3P52797 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
EFNA3P52797 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
EFNA3P52797 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
EFNA3P52797 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
EFNA3P52797 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
EFNA3P52797 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
EFNA3P52797 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
EFNA3P52797 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
EFNA3P52797 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
EFNA3P52797 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
EFNA3P52797 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
EFNA3P52797 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
EFNA3P52797 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.45■□□□□ 0.7
EFNA3P52797 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.45■□□□□ 0.7
EFNA3P52797 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
EFNA3P52797 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.45■□□□□ 0.7
EFNA3P52797 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.45■□□□□ 0.7
EFNA3P52797 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
EFNA3P52797 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
EFNA3P52797 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
EFNA3P52797 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
EFNA3P52797 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.44■□□□□ 0.7
EFNA3P52797 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.44■□□□□ 0.7
EFNA3P52797 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.44■□□□□ 0.7
EFNA3P52797 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
EFNA3P52797 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
EFNA3P52797 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
EFNA3P52797 MIPEPP3-201ENST00000412105 444 ntBASIC19.44■□□□□ 0.7
EFNA3P52797 AL512625.2-201ENST00000417533 625 ntBASIC19.44■□□□□ 0.7
EFNA3P52797 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.44■□□□□ 0.7
EFNA3P52797 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.44■□□□□ 0.7
EFNA3P52797 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.44■□□□□ 0.7
EFNA3P52797 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.44■□□□□ 0.7
EFNA3P52797 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
EFNA3P52797 MKRN4P-201ENST00000444706 1521 ntBASIC19.44■□□□□ 0.7
EFNA3P52797 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
EFNA3P52797 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
EFNA3P52797 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
EFNA3P52797 AC010980.2-201ENST00000587099 1412 ntBASIC19.43■□□□□ 0.7
EFNA3P52797 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.43■□□□□ 0.7
EFNA3P52797 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
EFNA3P52797 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
EFNA3P52797 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
EFNA3P52797 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
EFNA3P52797 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.43■□□□□ 0.7
EFNA3P52797 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.43■□□□□ 0.7
EFNA3P52797 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.43■□□□□ 0.7
EFNA3P52797 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
EFNA3P52797 AC069236.1-201ENST00000604339 616 ntBASIC19.43■□□□□ 0.7
EFNA3P52797 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
EFNA3P52797 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
EFNA3P52797 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
EFNA3P52797 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
EFNA3P52797 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.43■□□□□ 0.7
EFNA3P52797 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
EFNA3P52797 AL024507.2-201ENST00000606070 2574 ntBASIC19.42■□□□□ 0.7
EFNA3P52797 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.42■□□□□ 0.7
EFNA3P52797 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.42■□□□□ 0.7
EFNA3P52797 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
EFNA3P52797 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
EFNA3P52797 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
EFNA3P52797 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
EFNA3P52797 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
EFNA3P52797 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
EFNA3P52797 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
EFNA3P52797 SLC29A4P1-201ENST00000398760 971 ntBASIC19.42■□□□□ 0.7
EFNA3P52797 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.42■□□□□ 0.7
EFNA3P52797 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.42■□□□□ 0.7
EFNA3P52797 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
EFNA3P52797 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
EFNA3P52797 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.42■□□□□ 0.7
EFNA3P52797 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
EFNA3P52797 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
EFNA3P52797 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
EFNA3P52797 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
EFNA3P52797 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
EFNA3P52797 AC079834.2-201ENST00000609776 1949 ntBASIC19.41■□□□□ 0.7
EFNA3P52797 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
EFNA3P52797 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
EFNA3P52797 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
EFNA3P52797 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.41■□□□□ 0.7
EFNA3P52797 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
EFNA3P52797 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.41■□□□□ 0.7
EFNA3P52797 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms