Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC11.92□□□□□ -0.5
Xcl1P47993 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC11.92□□□□□ -0.5
Xcl1P47993 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Xcl1P47993 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Xcl1P47993 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Xcl1P47993 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Xcl1P47993 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Xcl1P47993 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Xcl1P47993 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Xcl1P47993 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Xcl1P47993 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Xcl1P47993 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Xcl1P47993 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Xcl1P47993 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Xcl1P47993 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Xcl1P47993 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Xcl1P47993 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Xcl1P47993 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Xcl1P47993 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Xcl1P47993 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC11.91□□□□□ -0.5
Xcl1P47993 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Xcl1P47993 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC11.91□□□□□ -0.5
Xcl1P47993 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Xcl1P47993 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Xcl1P47993 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Xcl1P47993 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Xcl1P47993 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Xcl1P47993 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Xcl1P47993 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC11.91□□□□□ -0.5
Xcl1P47993 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Xcl1P47993 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Xcl1P47993 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Xcl1P47993 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Xcl1P47993 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Xcl1P47993 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Xcl1P47993 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Xcl1P47993 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Xcl1P47993 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Xcl1P47993 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Xcl1P47993 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Xcl1P47993 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Xcl1P47993 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Xcl1P47993 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Xcl1P47993 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Xcl1P47993 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Xcl1P47993 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC11.9□□□□□ -0.5
Xcl1P47993 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Xcl1P47993 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Xcl1P47993 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC11.9□□□□□ -0.5
Xcl1P47993 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Xcl1P47993 Gm45855-201ENSMUST00000212546 880 ntBASIC11.9□□□□□ -0.5
Xcl1P47993 Tdp2-203ENSMUST00000223804 1136 ntBASIC11.9□□□□□ -0.5
Xcl1P47993 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Xcl1P47993 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Xcl1P47993 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Xcl1P47993 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC11.9□□□□□ -0.5
Xcl1P47993 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Xcl1P47993 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Xcl1P47993 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Xcl1P47993 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Xcl1P47993 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC11.9□□□□□ -0.51
Xcl1P47993 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Xcl1P47993 CT010478.1-201ENSMUST00000220747 2787 ntBASIC11.9□□□□□ -0.51
Xcl1P47993 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Xcl1P47993 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Xcl1P47993 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Xcl1P47993 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Xcl1P47993 Gm43338-201ENSMUST00000198617 2223 ntBASIC11.89□□□□□ -0.51
Xcl1P47993 Gm42809-201ENSMUST00000198429 1138 ntBASIC11.89□□□□□ -0.51
Xcl1P47993 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Xcl1P47993 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Xcl1P47993 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Xcl1P47993 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Xcl1P47993 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Xcl1P47993 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Xcl1P47993 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Xcl1P47993 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Xcl1P47993 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Xcl1P47993 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Xcl1P47993 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Xcl1P47993 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Xcl1P47993 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Xcl1P47993 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Xcl1P47993 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Xcl1P47993 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Xcl1P47993 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Xcl1P47993 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Xcl1P47993 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Xcl1P47993 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC11.88□□□□□ -0.51
Xcl1P47993 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Xcl1P47993 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Xcl1P47993 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Xcl1P47993 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC11.88□□□□□ -0.51
Xcl1P47993 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Xcl1P47993 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Xcl1P47993 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Xcl1P47993 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Xcl1P47993 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Xcl1P47993 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Xcl1P47993 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms