Protein–RNA interactions for Protein: P47017

LSM1, Sm-like protein LSm1, yeastyeast

Known RBP Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM1P47017 YPL142CYPL142C 318 nt1.71□□□□□ -2.14
LSM1P47017 MED8YBR193C 672 nt1.71□□□□□ -2.14
LSM1P47017 MES1YGR264C 2256 nt1.71□□□□□ -2.14
LSM1P47017 HSH155YMR288W 2916 nt1.71□□□□□ -2.14
LSM1P47017 CET1YPL228W 1650 nt1.71□□□□□ -2.14
LSM1P47017 UTP6YDR449C 1323 nt1.7□□□□□ -2.14
LSM1P47017 HER1YOR227W 3741 nt1.7□□□□□ -2.14
LSM1P47017 YDL163WYDL163W 303 nt1.7□□□□□ -2.14
LSM1P47017 YLR225CYLR225C 1224 nt1.7□□□□□ -2.14
LSM1P47017 CAT2YML042W 2013 nt1.7□□□□□ -2.14
LSM1P47017 BET5YML077W 480 nt1.7□□□□□ -2.14
LSM1P47017 RPC40YPR110C 1008 nt1.7□□□□□ -2.14
LSM1P47017 snR191snR191 274 nt1.7□□□□□ -2.14
LSM1P47017 MFB1YDR219C 1398 nt1.7□□□□□ -2.14
LSM1P47017 PKH3YDR466W 2697 nt1.7□□□□□ -2.14
LSM1P47017 VPS16YPL045W 2397 nt1.7□□□□□ -2.14
LSM1P47017 CLN2YPL256C 1638 nt1.69□□□□□ -2.14
LSM1P47017 MEC1YBR136W 7107 nt1.69□□□□□ -2.14
LSM1P47017 LHS1YKL073W 2646 nt1.69□□□□□ -2.14
LSM1P47017 VPS34YLR240W 2628 nt1.69□□□□□ -2.14
LSM1P47017 RTN1YDR233C 888 nt1.69□□□□□ -2.14
LSM1P47017 NNF1YJR112W 606 nt1.69□□□□□ -2.14
LSM1P47017 YLR379WYLR379W 375 nt1.69□□□□□ -2.14
LSM1P47017 YML094C-AYML094C-A 402 nt1.69□□□□□ -2.14
LSM1P47017 YNL234WYNL234W 1281 nt1.69□□□□□ -2.14
LSM1P47017 IRC20YLR247C 4671 nt1.69□□□□□ -2.14
LSM1P47017 TRL1YJL087C 2484 nt1.68□□□□□ -2.14
LSM1P47017 RLF2YPR018W 1821 nt1.68□□□□□ -2.14
LSM1P47017 CBS2YDR197W 1170 nt1.68□□□□□ -2.14
LSM1P47017 VTC1YER072W 390 nt1.68□□□□□ -2.14
LSM1P47017 MMS2YGL087C 414 nt1.68□□□□□ -2.14
LSM1P47017 ASG7YJL170C 630 nt1.68□□□□□ -2.14
LSM1P47017 CCL1YPR025C 1182 nt1.68□□□□□ -2.14
LSM1P47017 YLR446WYLR446W 1302 nt1.67□□□□□ -2.14
LSM1P47017 GYP5YPL249C 2685 nt1.67□□□□□ -2.14
LSM1P47017 HCS1YKL017C 2052 nt1.67□□□□□ -2.14
LSM1P47017 PRP6YBR055C 2700 nt1.67□□□□□ -2.14
LSM1P47017 CPR5YDR304C 678 nt1.67□□□□□ -2.14
LSM1P47017 DIG2YDR480W 972 nt1.67□□□□□ -2.14
LSM1P47017 YER107W-AYER107W-A 321 nt1.67□□□□□ -2.14
LSM1P47017 MTM1YGR257C 1101 nt1.67□□□□□ -2.14
LSM1P47017 CKA1YIL035C 1119 nt1.67□□□□□ -2.14
LSM1P47017 YAP5YIR018W 738 nt1.67□□□□□ -2.14
LSM1P47017 CSE4YKL049C 690 nt1.67□□□□□ -2.14
LSM1P47017 YKR075W-AYKR075W-A 270 nt1.67□□□□□ -2.14
LSM1P47017 SAR1YPL218W 573 nt1.67□□□□□ -2.14
LSM1P47017 YPR014CYPR014C 330 nt1.67□□□□□ -2.14
LSM1P47017 YBR277CYBR277C 402 nt1.67□□□□□ -2.14
LSM1P47017 UBR2YLR024C 5619 nt1.67□□□□□ -2.14
LSM1P47017 IRA1YBR140C 9279 nt1.66□□□□□ -2.14
LSM1P47017 YCR013CYCR013C 648 nt1.66□□□□□ -2.14
LSM1P47017 tC(GCA)BtC(GCA)B 72 nt1.66□□□□□ -2.14
LSM1P47017 tC(GCA)GtC(GCA)G 72 nt1.66□□□□□ -2.14
LSM1P47017 tC(GCA)P1tC(GCA)P1 72 nt1.66□□□□□ -2.14
LSM1P47017 tC(GCA)P2tC(GCA)P2 72 nt1.66□□□□□ -2.14
LSM1P47017 YHL044WYHL044W 708 nt1.66□□□□□ -2.14
LSM1P47017 YAL034C-BYAL034C-B 354 nt1.66□□□□□ -2.14
LSM1P47017 IRC21YMR073C 606 nt1.66□□□□□ -2.14
LSM1P47017 GCY1YOR120W 939 nt1.66□□□□□ -2.14
LSM1P47017 RRP6YOR001W 2202 nt1.66□□□□□ -2.14
LSM1P47017 MAL33YBR297W 1407 nt1.66□□□□□ -2.14
LSM1P47017 VPS35YJL154C 2835 nt1.65□□□□□ -2.14
LSM1P47017 NUF2YOL069W 1356 nt1.65□□□□□ -2.15
LSM1P47017 UBC5YDR059C 447 nt1.65□□□□□ -2.15
LSM1P47017 RRP1YDR087C 837 nt1.65□□□□□ -2.15
LSM1P47017 DPP1YDR284C 870 nt1.65□□□□□ -2.15
LSM1P47017 GPI19YDR437W 423 nt1.65□□□□□ -2.15
LSM1P47017 YER189WYER189W 369 nt1.65□□□□□ -2.15
LSM1P47017 YAL037WYAL037W 804 nt1.65□□□□□ -2.15
LSM1P47017 RPL36BYPL249C-A 303 nt1.65□□□□□ -2.15
LSM1P47017 YPR145C-AYPR145C-A 237 nt1.65□□□□□ -2.15
LSM1P47017 UBP16YPL072W 1500 nt1.65□□□□□ -2.15
LSM1P47017 JJJ2YJL162C 1752 nt1.64□□□□□ -2.15
LSM1P47017 IRC10YOL015W 1761 nt1.64□□□□□ -2.15
LSM1P47017 SHR3YDL212W 633 nt1.64□□□□□ -2.15
LSM1P47017 BRP1YGL007W 378 nt1.64□□□□□ -2.15
LSM1P47017 YIL012WYIL012W 342 nt1.64□□□□□ -2.15
LSM1P47017 YLR169WYLR169W 354 nt1.64□□□□□ -2.15
LSM1P47017 YIP3YNL044W 531 nt1.64□□□□□ -2.15
LSM1P47017 MET18YIL128W 3099 nt1.64□□□□□ -2.15
LSM1P47017 NPR1YNL183C 2373 nt1.63□□□□□ -2.15
LSM1P47017 YPR089WYPR089W 2667 nt1.63□□□□□ -2.15
LSM1P47017 snR68snR68 136 nt1.63□□□□□ -2.15
LSM1P47017 YDL186WYDL186W 834 nt1.63□□□□□ -2.15
LSM1P47017 NRG1YDR043C 696 nt1.63□□□□□ -2.15
LSM1P47017 RSM24YDR175C 960 nt1.63□□□□□ -2.15
LSM1P47017 MRP49YKL167C 414 nt1.63□□□□□ -2.15
LSM1P47017 MCT1YOR221C 1083 nt1.63□□□□□ -2.15
LSM1P47017 SBE22YHR103W 2559 nt1.63□□□□□ -2.15
LSM1P47017 VPS38YLR360W 1320 nt1.63□□□□□ -2.15
LSM1P47017 YEL1YBL060W 2064 nt1.62□□□□□ -2.15
LSM1P47017 SPT15YER148W 723 nt1.62□□□□□ -2.15
LSM1P47017 RPS25AYGR027C 327 nt1.62□□□□□ -2.15
LSM1P47017 ATG10YLL042C 504 nt1.62□□□□□ -2.15
LSM1P47017 YLR257WYLR257W 966 nt1.62□□□□□ -2.15
LSM1P47017 RPL6BYLR448W 531 nt1.62□□□□□ -2.15
LSM1P47017 SIP18YMR175W 240 nt1.62□□□□□ -2.15
LSM1P47017 MFA2YNL145W 117 nt1.62□□□□□ -2.15
LSM1P47017 ATG5YPL149W 885 nt1.62□□□□□ -2.15
LSM1P47017 GPI17YDR434W 1605 nt1.62□□□□□ -2.15
Retrieved 100 of 7,029 protein–RNA pairs in 14.9 ms