Protein–RNA interactions for Protein: P43235

CTSK, Cathepsin K, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSKP43235 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CTSKP43235 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CTSKP43235 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CTSKP43235 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CTSKP43235 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.63■□□□□ 0.89
CTSKP43235 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTSKP43235 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CTSKP43235 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTSKP43235 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
CTSKP43235 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.63■□□□□ 0.89
CTSKP43235 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.63■□□□□ 0.89
CTSKP43235 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CTSKP43235 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.63■□□□□ 0.89
CTSKP43235 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.63■□□□□ 0.89
CTSKP43235 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.63■□□□□ 0.89
CTSKP43235 AC006058.3-201ENST00000606217 1069 ntBASIC20.63■□□□□ 0.89
CTSKP43235 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CTSKP43235 AC003102.1-202ENST00000563394 1796 ntBASIC20.63■□□□□ 0.89
CTSKP43235 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CTSKP43235 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CTSKP43235 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CTSKP43235 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CTSKP43235 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTSKP43235 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTSKP43235 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTSKP43235 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CTSKP43235 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CTSKP43235 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTSKP43235 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
CTSKP43235 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.62■□□□□ 0.89
CTSKP43235 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CTSKP43235 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CTSKP43235 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.62■□□□□ 0.89
CTSKP43235 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.62■□□□□ 0.89
CTSKP43235 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
CTSKP43235 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CTSKP43235 AC007375.3-201ENST00000600936 2314 ntBASIC20.62■□□□□ 0.89
CTSKP43235 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTSKP43235 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTSKP43235 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.62■□□□□ 0.89
CTSKP43235 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.61■□□□□ 0.89
CTSKP43235 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTSKP43235 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CTSKP43235 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTSKP43235 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.61■□□□□ 0.89
CTSKP43235 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CTSKP43235 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTSKP43235 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTSKP43235 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CTSKP43235 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.61■□□□□ 0.89
CTSKP43235 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
CTSKP43235 LSM12P1-201ENST00000411836 588 ntBASIC20.61■□□□□ 0.89
CTSKP43235 AC128676.1-201ENST00000454392 318 ntBASIC20.61■□□□□ 0.89
CTSKP43235 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.61■□□□□ 0.89
CTSKP43235 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CTSKP43235 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.61■□□□□ 0.89
CTSKP43235 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CTSKP43235 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTSKP43235 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTSKP43235 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CTSKP43235 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTSKP43235 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CTSKP43235 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
CTSKP43235 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTSKP43235 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.6■□□□□ 0.89
CTSKP43235 UNC93B5-201ENST00000530315 699 ntBASIC20.6■□□□□ 0.89
CTSKP43235 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.6■□□□□ 0.89
CTSKP43235 AP006294.2-201ENST00000641667 209 ntBASIC20.6■□□□□ 0.89
CTSKP43235 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.6■□□□□ 0.89
CTSKP43235 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTSKP43235 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTSKP43235 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.6■□□□□ 0.89
CTSKP43235 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTSKP43235 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.59■□□□□ 0.89
CTSKP43235 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.59■□□□□ 0.89
CTSKP43235 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CTSKP43235 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.59■□□□□ 0.89
CTSKP43235 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
CTSKP43235 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
CTSKP43235 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CTSKP43235 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTSKP43235 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTSKP43235 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.59■□□□□ 0.89
CTSKP43235 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.59■□□□□ 0.89
CTSKP43235 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.59■□□□□ 0.89
CTSKP43235 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.59■□□□□ 0.89
CTSKP43235 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CTSKP43235 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CTSKP43235 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTSKP43235 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTSKP43235 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CTSKP43235 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CTSKP43235 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
CTSKP43235 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTSKP43235 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CTSKP43235 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.58■□□□□ 0.89
CTSKP43235 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CTSKP43235 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.58■□□□□ 0.89
CTSKP43235 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CTSKP43235 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms