Protein–RNA interactions for Protein: P41817

CUP9, Homeobox protein CUP9, yeastyeast

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CUP9P41817 SCH9YHR205W 2475 nt1.79□□□□□ -2.12
CUP9P41817 snR68snR68 136 nt1.79□□□□□ -2.12
CUP9P41817 SEC31YDL195W 3822 nt1.79□□□□□ -2.12
CUP9P41817 CPR5YDR304C 678 nt1.79□□□□□ -2.12
CUP9P41817 YHR182C-AYHR182C-A 474 nt1.79□□□□□ -2.12
CUP9P41817 RPL36AYMR194W 303 nt1.79□□□□□ -2.12
CUP9P41817 YOL024WYOL024W 519 nt1.79□□□□□ -2.12
CUP9P41817 TRM2YKR056W 1920 nt1.78□□□□□ -2.12
CUP9P41817 RMD5YDR255C 1266 nt1.78□□□□□ -2.12
CUP9P41817 TIF35YDR429C 825 nt1.78□□□□□ -2.12
CUP9P41817 YHR212CYHR212C 336 nt1.78□□□□□ -2.12
CUP9P41817 BOS1YLR078C 735 nt1.78□□□□□ -2.12
CUP9P41817 YAR060CYAR060C 336 nt1.78□□□□□ -2.12
CUP9P41817 FMP41YNL168C 780 nt1.78□□□□□ -2.12
CUP9P41817 FKS1YLR342W 5631 nt1.78□□□□□ -2.12
CUP9P41817 ELG1YOR144C 2376 nt1.78□□□□□ -2.12
CUP9P41817 HOP1YIL072W 1818 nt1.77□□□□□ -2.13
CUP9P41817 YNL018CYNL018C 1839 nt1.77□□□□□ -2.13
CUP9P41817 ROY1YMR258C 1662 nt1.77□□□□□ -2.13
CUP9P41817 MDM10YAL010C 1482 nt1.77□□□□□ -2.13
CUP9P41817 RTG3YBL103C 1461 nt1.77□□□□□ -2.13
CUP9P41817 SLF1YDR515W 1344 nt1.77□□□□□ -2.13
CUP9P41817 YDR124WYDR124W 975 nt1.77□□□□□ -2.13
CUP9P41817 YFH7YFR007W 1062 nt1.77□□□□□ -2.13
CUP9P41817 RMP1YLR145W 606 nt1.77□□□□□ -2.13
CUP9P41817 ARC18YLR370C 537 nt1.77□□□□□ -2.13
CUP9P41817 PDS5YMR076C 3834 nt1.77□□□□□ -2.13
CUP9P41817 INO80YGL150C 4470 nt1.77□□□□□ -2.13
CUP9P41817 YDR131CYDR131C 1671 nt1.77□□□□□ -2.13
CUP9P41817 ARP9YMR033W 1404 nt1.76□□□□□ -2.13
CUP9P41817 USO1YDL058W 5373 nt1.76□□□□□ -2.13
CUP9P41817 SSF2YDR312W 1362 nt1.76□□□□□ -2.13
CUP9P41817 YNR066CYNR066C 1311 nt1.76□□□□□ -2.13
CUP9P41817 SNU23YDL098C 585 nt1.76□□□□□ -2.13
CUP9P41817 RRF1YHR038W 693 nt1.76□□□□□ -2.13
CUP9P41817 YKL131WYKL131W 522 nt1.76□□□□□ -2.13
CUP9P41817 YBL012CYBL012C 402 nt1.76□□□□□ -2.13
CUP9P41817 YMR099CYMR099C 894 nt1.76□□□□□ -2.13
CUP9P41817 YMR181CYMR181C 465 nt1.76□□□□□ -2.13
CUP9P41817 ERV15YBR210W 429 nt1.76□□□□□ -2.13
CUP9P41817 YCT1YLL055W 1596 nt1.76□□□□□ -2.13
CUP9P41817 ARK1YNL020C 1917 nt1.76□□□□□ -2.13
CUP9P41817 NCS2YNL119W 1482 nt1.75□□□□□ -2.13
CUP9P41817 UBP2YOR124C 3819 nt1.75□□□□□ -2.13
CUP9P41817 APC2YLR127C 2562 nt1.75□□□□□ -2.13
CUP9P41817 YFR016CYFR016C 3702 nt1.75□□□□□ -2.13
CUP9P41817 GAL80YML051W 1308 nt1.75□□□□□ -2.13
CUP9P41817 MPO1YGL010W 525 nt1.75□□□□□ -2.13
CUP9P41817 RTS3YGR161C 792 nt1.75□□□□□ -2.13
CUP9P41817 IKI1YHR187W 930 nt1.75□□□□□ -2.13
CUP9P41817 YLR042CYLR042C 486 nt1.75□□□□□ -2.13
CUP9P41817 YMR320WYMR320W 306 nt1.75□□□□□ -2.13
CUP9P41817 PEX15YOL044W 1152 nt1.75□□□□□ -2.13
CUP9P41817 YRO2YBR054W 1035 nt1.75□□□□□ -2.13
CUP9P41817 YPR014CYPR014C 330 nt1.75□□□□□ -2.13
CUP9P41817 NPR3YHL023C 3441 nt1.75□□□□□ -2.13
CUP9P41817 SNU114YKL173W 3027 nt1.75□□□□□ -2.13
CUP9P41817 KIP1YBL063W 3336 nt1.75□□□□□ -2.13
CUP9P41817 MDM36YPR083W 1740 nt1.74□□□□□ -2.13
CUP9P41817 YDR179W-AYDR179W-A 1392 nt1.74□□□□□ -2.13
CUP9P41817 NOP12YOL041C 1380 nt1.74□□□□□ -2.13
CUP9P41817 INP51YIL002C 2841 nt1.74□□□□□ -2.13
CUP9P41817 MIG2YGL209W 1149 nt1.74□□□□□ -2.13
CUP9P41817 YJL202CYJL202C 348 nt1.74□□□□□ -2.13
CUP9P41817 CDC5YMR001C 2118 nt1.74□□□□□ -2.13
CUP9P41817 GRX7YBR014C 612 nt1.74□□□□□ -2.13
CUP9P41817 SME1YOR159C 285 nt1.74□□□□□ -2.13
CUP9P41817 DSE1YER124C 1722 nt1.74□□□□□ -2.13
CUP9P41817 CST9YLR394W 1449 nt1.74□□□□□ -2.13
CUP9P41817 RAV1YJR033C 4074 nt1.73□□□□□ -2.13
CUP9P41817 HOS4YIL112W 3252 nt1.73□□□□□ -2.13
CUP9P41817 RGA2YDR379W 3030 nt1.73□□□□□ -2.13
CUP9P41817 YDR170W-AYDR170W-A 1323 nt1.73□□□□□ -2.13
CUP9P41817 YNL284C-AYNL284C-A 1323 nt1.73□□□□□ -2.13
CUP9P41817 UBC13YDR092W 462 nt1.73□□□□□ -2.13
CUP9P41817 VMA10YHR039C-A 345 nt1.73□□□□□ -2.13
CUP9P41817 YAL034C-BYAL034C-B 354 nt1.73□□□□□ -2.13
CUP9P41817 PAU8YAL068C 363 nt1.73□□□□□ -2.13
CUP9P41817 NGL1YOL042W 1092 nt1.73□□□□□ -2.13
CUP9P41817 PAU20YOL161C 363 nt1.73□□□□□ -2.13
CUP9P41817 YJL016WYJL016W 1686 nt1.73□□□□□ -2.13
CUP9P41817 RRP12YPL012W 3687 nt1.73□□□□□ -2.13
CUP9P41817 COS111YBR203W 2775 nt1.73□□□□□ -2.13
CUP9P41817 RGL1YPL066W 1440 nt1.73□□□□□ -2.13
CUP9P41817 SYO1YDL063C 1863 nt1.72□□□□□ -2.13
CUP9P41817 YFR054CYFR054C 579 nt1.72□□□□□ -2.13
CUP9P41817 YGL039WYGL039W 1047 nt1.72□□□□□ -2.13
CUP9P41817 TDA10YGR205W 873 nt1.72□□□□□ -2.13
CUP9P41817 YHR071C-AYHR071C-A 321 nt1.72□□□□□ -2.13
CUP9P41817 YIL012WYIL012W 342 nt1.72□□□□□ -2.13
CUP9P41817 YJR071WYJR071W 369 nt1.72□□□□□ -2.13
CUP9P41817 MET14YKL001C 609 nt1.72□□□□□ -2.13
CUP9P41817 VPH2YKL119C 648 nt1.72□□□□□ -2.13
CUP9P41817 YLR169WYLR169W 354 nt1.72□□□□□ -2.13
CUP9P41817 YNL171CYNL171C 369 nt1.72□□□□□ -2.13
CUP9P41817 snR191snR191 274 nt1.72□□□□□ -2.13
CUP9P41817 POM152YMR129W 4014 nt1.71□□□□□ -2.14
CUP9P41817 UBR2YLR024C 5619 nt1.71□□□□□ -2.14
CUP9P41817 NEO1YIL048W 3456 nt1.71□□□□□ -2.14
CUP9P41817 TRM82YDR165W 1335 nt1.71□□□□□ -2.14
Retrieved 100 of 7,029 protein–RNA pairs in 23.9 ms