Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.95■□□□□ 0.94
HADHAP40939 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HADHAP40939 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
HADHAP40939 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.95■□□□□ 0.94
HADHAP40939 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HADHAP40939 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
HADHAP40939 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HADHAP40939 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HADHAP40939 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HADHAP40939 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HADHAP40939 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HADHAP40939 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
HADHAP40939 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.94■□□□□ 0.94
HADHAP40939 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.94■□□□□ 0.94
HADHAP40939 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.94■□□□□ 0.94
HADHAP40939 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HADHAP40939 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.94■□□□□ 0.94
HADHAP40939 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
HADHAP40939 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HADHAP40939 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HADHAP40939 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.94■□□□□ 0.94
HADHAP40939 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HADHAP40939 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
HADHAP40939 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.93■□□□□ 0.94
HADHAP40939 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HADHAP40939 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HADHAP40939 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HADHAP40939 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HADHAP40939 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
HADHAP40939 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.93■□□□□ 0.94
HADHAP40939 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
HADHAP40939 AP001160.3-201ENST00000601484 763 ntBASIC20.93■□□□□ 0.94
HADHAP40939 AC092666.2-201ENST00000613287 246 ntBASIC20.93■□□□□ 0.94
HADHAP40939 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
HADHAP40939 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
HADHAP40939 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
HADHAP40939 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HADHAP40939 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HADHAP40939 AC061975.6-201ENST00000579045 1553 ntBASIC20.93■□□□□ 0.94
HADHAP40939 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HADHAP40939 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.92■□□□□ 0.94
HADHAP40939 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HADHAP40939 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
HADHAP40939 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HADHAP40939 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.92■□□□□ 0.94
HADHAP40939 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HADHAP40939 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HADHAP40939 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HADHAP40939 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
HADHAP40939 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HADHAP40939 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HADHAP40939 KRT18P20-201ENST00000548986 1279 ntBASIC20.92■□□□□ 0.94
HADHAP40939 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
HADHAP40939 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.92■□□□□ 0.94
HADHAP40939 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.92■□□□□ 0.94
HADHAP40939 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.92■□□□□ 0.94
HADHAP40939 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
HADHAP40939 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HADHAP40939 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.92■□□□□ 0.94
HADHAP40939 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
HADHAP40939 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HADHAP40939 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HADHAP40939 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.91■□□□□ 0.94
HADHAP40939 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.91■□□□□ 0.94
HADHAP40939 KRT16P2-201ENST00000414673 1423 ntBASIC20.91■□□□□ 0.94
HADHAP40939 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HADHAP40939 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
HADHAP40939 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.91■□□□□ 0.94
HADHAP40939 NTF6G-201ENST00000591094 616 ntBASIC20.91■□□□□ 0.94
HADHAP40939 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HADHAP40939 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HADHAP40939 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
HADHAP40939 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HADHAP40939 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HADHAP40939 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.9■□□□□ 0.94
HADHAP40939 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
HADHAP40939 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HADHAP40939 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.9■□□□□ 0.94
HADHAP40939 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HADHAP40939 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HADHAP40939 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.9■□□□□ 0.94
HADHAP40939 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
HADHAP40939 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.9■□□□□ 0.94
HADHAP40939 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HADHAP40939 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HADHAP40939 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
HADHAP40939 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
HADHAP40939 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
HADHAP40939 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
HADHAP40939 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
HADHAP40939 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
HADHAP40939 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.89■□□□□ 0.93
HADHAP40939 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.89■□□□□ 0.93
HADHAP40939 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.89■□□□□ 0.93
HADHAP40939 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
HADHAP40939 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.89■□□□□ 0.93
HADHAP40939 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HADHAP40939 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HADHAP40939 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.89■□□□□ 0.93
HADHAP40939 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms