Protein–RNA interactions for Protein: P33527

ABCC1, Multidrug resistance-associated protein 1, humanhuman

Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC1P33527 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
ABCC1P33527 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC31.46■■■□□ 2.63
ABCC1P33527 AC127496.7-201ENST00000625110 1798 ntBASIC31.46■■■□□ 2.63
ABCC1P33527 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC31.46■■■□□ 2.63
ABCC1P33527 AC211429.1-201ENST00000415277 523 ntBASIC31.46■■■□□ 2.63
ABCC1P33527 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
ABCC1P33527 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC31.46■■■□□ 2.63
ABCC1P33527 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC31.46■■■□□ 2.63
ABCC1P33527 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC31.46■■■□□ 2.63
ABCC1P33527 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
ABCC1P33527 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC31.46■■■□□ 2.63
ABCC1P33527 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
ABCC1P33527 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
ABCC1P33527 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC31.45■■■□□ 2.63
ABCC1P33527 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC31.45■■■□□ 2.63
ABCC1P33527 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC31.45■■■□□ 2.63
ABCC1P33527 FAM99A-202ENST00000538190 1989 ntBASIC31.45■■■□□ 2.62
ABCC1P33527 MIR1224-201ENST00000408193 85 ntBASIC31.44■■■□□ 2.62
ABCC1P33527 LY6E-205ENST00000519611 635 ntTSL 3 BASIC31.44■■■□□ 2.62
ABCC1P33527 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC31.44■■■□□ 2.62
ABCC1P33527 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC31.44■■■□□ 2.62
ABCC1P33527 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
ABCC1P33527 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
ABCC1P33527 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
ABCC1P33527 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC31.44■■■□□ 2.62
ABCC1P33527 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC31.44■■■□□ 2.62
ABCC1P33527 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC31.44■■■□□ 2.62
ABCC1P33527 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC31.44■■■□□ 2.62
ABCC1P33527 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC31.44■■■□□ 2.62
ABCC1P33527 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC31.44■■■□□ 2.62
ABCC1P33527 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
ABCC1P33527 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
ABCC1P33527 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC31.43■■■□□ 2.62
ABCC1P33527 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
ABCC1P33527 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
ABCC1P33527 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC31.43■■■□□ 2.62
ABCC1P33527 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC31.43■■■□□ 2.62
ABCC1P33527 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
ABCC1P33527 AC239809.2-201ENST00000415381 517 ntBASIC31.43■■■□□ 2.62
ABCC1P33527 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC31.43■■■□□ 2.62
ABCC1P33527 AL049637.2-201ENST00000641778 930 ntBASIC31.43■■■□□ 2.62
ABCC1P33527 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
ABCC1P33527 AC080038.3-201ENST00000623346 1952 ntBASIC31.42■■■□□ 2.62
ABCC1P33527 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
ABCC1P33527 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
ABCC1P33527 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
ABCC1P33527 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC31.42■■■□□ 2.62
ABCC1P33527 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC31.42■■■□□ 2.62
ABCC1P33527 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC31.42■■■□□ 2.62
ABCC1P33527 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
ABCC1P33527 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC31.42■■■□□ 2.62
ABCC1P33527 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC31.42■■■□□ 2.62
ABCC1P33527 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC31.42■■■□□ 2.62
ABCC1P33527 NXN-202ENST00000537628 1340 ntTSL 3 BASIC31.42■■■□□ 2.62
ABCC1P33527 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC31.42■■■□□ 2.62
ABCC1P33527 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
ABCC1P33527 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC31.41■■■□□ 2.62
ABCC1P33527 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
ABCC1P33527 MAX-217ENST00000557277 728 ntTSL 3 BASIC31.41■■■□□ 2.62
ABCC1P33527 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC31.41■■■□□ 2.62
ABCC1P33527 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC31.41■■■□□ 2.62
ABCC1P33527 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
ABCC1P33527 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC31.41■■■□□ 2.62
ABCC1P33527 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
ABCC1P33527 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
ABCC1P33527 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC31.4■■■□□ 2.62
ABCC1P33527 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC31.4■■■□□ 2.62
ABCC1P33527 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
ABCC1P33527 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC31.4■■■□□ 2.62
ABCC1P33527 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC31.4■■■□□ 2.62
ABCC1P33527 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
ABCC1P33527 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
ABCC1P33527 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
ABCC1P33527 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC31.39■■■□□ 2.62
ABCC1P33527 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
ABCC1P33527 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC31.39■■■□□ 2.62
ABCC1P33527 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC31.39■■■□□ 2.62
ABCC1P33527 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
ABCC1P33527 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
ABCC1P33527 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
ABCC1P33527 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC31.39■■■□□ 2.62
ABCC1P33527 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
ABCC1P33527 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC31.39■■■□□ 2.61
ABCC1P33527 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC31.39■■■□□ 2.61
ABCC1P33527 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC31.39■■■□□ 2.61
ABCC1P33527 AC113410.3-201ENST00000623366 203 ntBASIC31.39■■■□□ 2.61
ABCC1P33527 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.61
ABCC1P33527 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.61
ABCC1P33527 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
ABCC1P33527 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC31.38■■■□□ 2.61
ABCC1P33527 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC31.38■■■□□ 2.61
ABCC1P33527 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
ABCC1P33527 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
ABCC1P33527 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
ABCC1P33527 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
ABCC1P33527 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
ABCC1P33527 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC31.38■■■□□ 2.61
ABCC1P33527 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC31.38■■■□□ 2.61
ABCC1P33527 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC31.38■■■□□ 2.61
ABCC1P33527 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC31.38■■■□□ 2.61
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms