Protein–RNA interactions for Protein: P33202

UFD4, Ubiquitin fusion degradation protein 4, yeastyeast

Predictions only

Length 1,483 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD4P33202 YGR111WYGR111W 1203 nt1.67□□□□□ -2.14
UFD4P33202 MRPL6YHR147C 645 nt1.67□□□□□ -2.14
UFD4P33202 YMR242W-AYMR242W-A 90 nt1.67□□□□□ -2.14
UFD4P33202 IST2YBR086C 2841 nt1.67□□□□□ -2.14
UFD4P33202 RPL1BYGL135W 654 nt1.66□□□□□ -2.14
UFD4P33202 ATX2YOR079C 942 nt1.66□□□□□ -2.14
UFD4P33202 RPL1AYPL220W 654 nt1.66□□□□□ -2.14
UFD4P33202 AFI1YOR129C 2682 nt1.66□□□□□ -2.14
UFD4P33202 COS12YGL263W 1143 nt1.65□□□□□ -2.15
UFD4P33202 YKR011CYKR011C 1062 nt1.65□□□□□ -2.15
UFD4P33202 YLR416CYLR416C 399 nt1.65□□□□□ -2.15
UFD4P33202 MCM21YDR318W 1107 nt1.64□□□□□ -2.15
UFD4P33202 IRC6YFR043C 714 nt1.64□□□□□ -2.15
UFD4P33202 AIM18YHR198C 966 nt1.64□□□□□ -2.15
UFD4P33202 YBR255C-AYBR255C-A 363 nt1.64□□□□□ -2.15
UFD4P33202 MED1YPR070W 1701 nt1.64□□□□□ -2.15
UFD4P33202 SPC110YDR356W 2835 nt1.63□□□□□ -2.15
UFD4P33202 YGL193CYGL193C 312 nt1.63□□□□□ -2.15
UFD4P33202 TAZ1YPR140W 1146 nt1.63□□□□□ -2.15
UFD4P33202 PBY1YBR094W 2262 nt1.63□□□□□ -2.15
UFD4P33202 VHR1YIL056W 1923 nt1.63□□□□□ -2.15
UFD4P33202 PRP18YGR006W 756 nt1.63□□□□□ -2.15
UFD4P33202 YET1YKL065C 621 nt1.63□□□□□ -2.15
UFD4P33202 YOL014WYOL014W 375 nt1.63□□□□□ -2.15
UFD4P33202 SPT7YBR081C 3999 nt1.62□□□□□ -2.15
UFD4P33202 RGP1YDR137W 1992 nt1.62□□□□□ -2.15
UFD4P33202 LSM6YDR378C 261 nt1.62□□□□□ -2.15
UFD4P33202 TIM9YEL020W-A 264 nt1.62□□□□□ -2.15
UFD4P33202 MTL1YGR023W 1656 nt1.61□□□□□ -2.15
UFD4P33202 YGR117CYGR117C 1431 nt1.61□□□□□ -2.15
UFD4P33202 KEI1YDR367W 666 nt1.61□□□□□ -2.15
UFD4P33202 WBP1YEL002C 1293 nt1.61□□□□□ -2.15
UFD4P33202 YBR013CYBR013C 390 nt1.61□□□□□ -2.15
UFD4P33202 APA1YCL050C 966 nt1.61□□□□□ -2.15
UFD4P33202 YDR179W-AYDR179W-A 1392 nt1.6□□□□□ -2.15
UFD4P33202 NRG1YDR043C 696 nt1.6□□□□□ -2.15
UFD4P33202 OTU2YHL013C 924 nt1.6□□□□□ -2.15
UFD4P33202 YIR017W-AYIR017W-A 600 nt1.6□□□□□ -2.15
UFD4P33202 IME1YJR094C 1083 nt1.6□□□□□ -2.15
UFD4P33202 YMR321CYMR321C 318 nt1.6□□□□□ -2.15
UFD4P33202 YBR238CYBR238C 2196 nt1.6□□□□□ -2.15
UFD4P33202 RAD18YCR066W 1464 nt1.59□□□□□ -2.15
UFD4P33202 YIR043CYIR043C 693 nt1.59□□□□□ -2.15
UFD4P33202 YNL046WYNL046W 519 nt1.59□□□□□ -2.15
UFD4P33202 YIL080WYIL080W 4722 nt1.59□□□□□ -2.16
UFD4P33202 URC2YDR520C 2319 nt1.58□□□□□ -2.16
UFD4P33202 MCM22YJR135C 720 nt1.58□□□□□ -2.16
UFD4P33202 TPK3YKL166C 1197 nt1.58□□□□□ -2.16
UFD4P33202 YMR175W-AYMR175W-A 195 nt1.58□□□□□ -2.16
UFD4P33202 HHF1YBR009C 312 nt1.58□□□□□ -2.16
UFD4P33202 SSP2YOR242C 1116 nt1.57□□□□□ -2.16
UFD4P33202 RPH1YER169W 2391 nt1.57□□□□□ -2.16
UFD4P33202 NAM7YMR080C 2916 nt1.57□□□□□ -2.16
UFD4P33202 ALG8YOR067C 1734 nt1.57□□□□□ -2.16
UFD4P33202 HMLALPHA1YCL066W 528 nt1.56□□□□□ -2.16
UFD4P33202 MATALPHA1YCR040W 528 nt1.56□□□□□ -2.16
UFD4P33202 GPM2YDL021W 936 nt1.56□□□□□ -2.16
UFD4P33202 HTA2YBL003C 399 nt1.56□□□□□ -2.16
UFD4P33202 PBI1YPL272C 1554 nt1.56□□□□□ -2.16
UFD4P33202 ALG11YNL048W 1647 nt1.56□□□□□ -2.16
UFD4P33202 YHR182C-AYHR182C-A 474 nt1.56□□□□□ -2.16
UFD4P33202 YIL020C-AYIL020C-A 339 nt1.56□□□□□ -2.16
UFD4P33202 YPT52YKR014C 705 nt1.56□□□□□ -2.16
UFD4P33202 YPL071CYPL071C 471 nt1.56□□□□□ -2.16
UFD4P33202 AIM14YGL160W 1713 nt1.55□□□□□ -2.16
UFD4P33202 YMR160WYMR160W 2451 nt1.55□□□□□ -2.16
UFD4P33202 PGD1YGL025C 1194 nt1.55□□□□□ -2.16
UFD4P33202 YGR283CYGR283C 1026 nt1.55□□□□□ -2.16
UFD4P33202 ARG3YJL088W 1017 nt1.55□□□□□ -2.16
UFD4P33202 TRM112YNR046W 408 nt1.55□□□□□ -2.16
UFD4P33202 RNH70YGR276C 1662 nt1.55□□□□□ -2.16
UFD4P33202 BDP1YNL039W 1785 nt1.55□□□□□ -2.16
UFD4P33202 YOR192C-BYOR192C-B 5313 nt1.55□□□□□ -2.16
UFD4P33202 EFG1YGR271C-A 702 nt1.54□□□□□ -2.16
UFD4P33202 RPL34BYIL052C 366 nt1.54□□□□□ -2.16
UFD4P33202 YNL109WYNL109W 546 nt1.54□□□□□ -2.16
UFD4P33202 NDJ1YOL104C 1059 nt1.54□□□□□ -2.16
UFD4P33202 YMR1YJR110W 2067 nt1.54□□□□□ -2.16
UFD4P33202 MGA1YGR249W 1371 nt1.53□□□□□ -2.16
UFD4P33202 YDL211CYDL211C 1119 nt1.53□□□□□ -2.16
UFD4P33202 HAL1YPR005C 885 nt1.53□□□□□ -2.16
UFD4P33202 PKH2YOL100W 3246 nt1.53□□□□□ -2.16
UFD4P33202 AVT2YEL064C 1443 nt1.52□□□□□ -2.17
UFD4P33202 YOL159CYOL159C 516 nt1.52□□□□□ -2.17
UFD4P33202 RPN8YOR261C 1017 nt1.52□□□□□ -2.17
UFD4P33202 PIG2YIL045W 1617 nt1.52□□□□□ -2.17
UFD4P33202 FIR1YER032W 2631 nt1.52□□□□□ -2.17
UFD4P33202 TIM18YOR297C 579 nt1.51□□□□□ -2.17
UFD4P33202 YCT1YLL055W 1596 nt1.51□□□□□ -2.17
UFD4P33202 SMC4YLR086W 4257 nt1.51□□□□□ -2.17
UFD4P33202 TFC8YPL007C 1767 nt1.51□□□□□ -2.17
UFD4P33202 SLY41YOR307C 1362 nt1.51□□□□□ -2.17
UFD4P33202 TPP1YMR156C 717 nt1.5□□□□□ -2.17
UFD4P33202 YSY6YBR162W-A 198 nt1.5□□□□□ -2.17
UFD4P33202 BAS1YKR099W 2436 nt1.5□□□□□ -2.17
UFD4P33202 ARF1YDL192W 546 nt1.5□□□□□ -2.17
UFD4P33202 COX13YGL191W 390 nt1.5□□□□□ -2.17
UFD4P33202 TDA10YGR205W 873 nt1.5□□□□□ -2.17
UFD4P33202 SNF12YNR023W 1701 nt1.5□□□□□ -2.17
UFD4P33202 NOP56YLR197W 1515 nt1.49□□□□□ -2.17
Retrieved 100 of 7,029 protein–RNA pairs in 32.2 ms