Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXA6P31267 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXA6P31267 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HOXA6P31267 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.68■□□□□ 0.9
HOXA6P31267 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HOXA6P31267 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.68■□□□□ 0.9
HOXA6P31267 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HOXA6P31267 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXA6P31267 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.68■□□□□ 0.9
HOXA6P31267 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC20.68■□□□□ 0.9
HOXA6P31267 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.68■□□□□ 0.9
HOXA6P31267 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.68■□□□□ 0.9
HOXA6P31267 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXA6P31267 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXA6P31267 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXA6P31267 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXA6P31267 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXA6P31267 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
HOXA6P31267 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
HOXA6P31267 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.67■□□□□ 0.9
HOXA6P31267 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
HOXA6P31267 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
HOXA6P31267 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
HOXA6P31267 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.67■□□□□ 0.9
HOXA6P31267 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.67■□□□□ 0.9
HOXA6P31267 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HOXA6P31267 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.67■□□□□ 0.9
HOXA6P31267 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
HOXA6P31267 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.67■□□□□ 0.9
HOXA6P31267 RARRES2P10-201ENST00000564312 460 ntBASIC20.67■□□□□ 0.9
HOXA6P31267 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC20.67■□□□□ 0.9
HOXA6P31267 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
HOXA6P31267 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HOXA6P31267 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.67■□□□□ 0.9
HOXA6P31267 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HOXA6P31267 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HOXA6P31267 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HOXA6P31267 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.66■□□□□ 0.9
HOXA6P31267 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
HOXA6P31267 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HOXA6P31267 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HOXA6P31267 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.66■□□□□ 0.9
HOXA6P31267 AC239809.2-201ENST00000415381 517 ntBASIC20.66■□□□□ 0.9
HOXA6P31267 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HOXA6P31267 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.66■□□□□ 0.9
HOXA6P31267 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.66■□□□□ 0.9
HOXA6P31267 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.66■□□□□ 0.9
HOXA6P31267 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HOXA6P31267 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXA6P31267 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXA6P31267 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HOXA6P31267 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
HOXA6P31267 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXA6P31267 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HOXA6P31267 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HOXA6P31267 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HOXA6P31267 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXA6P31267 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HOXA6P31267 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
HOXA6P31267 AC093323.1-202ENST00000635031 2045 ntBASIC20.65■□□□□ 0.9
HOXA6P31267 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.65■□□□□ 0.9
HOXA6P31267 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HOXA6P31267 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.65■□□□□ 0.9
HOXA6P31267 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
HOXA6P31267 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.65■□□□□ 0.9
HOXA6P31267 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
HOXA6P31267 AC087499.1-201ENST00000418141 1075 ntBASIC20.65■□□□□ 0.9
HOXA6P31267 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.65■□□□□ 0.9
HOXA6P31267 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC20.65■□□□□ 0.9
HOXA6P31267 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.65■□□□□ 0.9
HOXA6P31267 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.65■□□□□ 0.9
HOXA6P31267 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.65■□□□□ 0.9
HOXA6P31267 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HOXA6P31267 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
HOXA6P31267 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.65■□□□□ 0.9
HOXA6P31267 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.65■□□□□ 0.9
HOXA6P31267 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
HOXA6P31267 AL023875.1-201ENST00000640777 796 ntBASIC20.65■□□□□ 0.9
HOXA6P31267 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
HOXA6P31267 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HOXA6P31267 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
HOXA6P31267 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
HOXA6P31267 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
HOXA6P31267 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
HOXA6P31267 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
HOXA6P31267 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
HOXA6P31267 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.64■□□□□ 0.9
HOXA6P31267 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
HOXA6P31267 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.64■□□□□ 0.9
HOXA6P31267 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
HOXA6P31267 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HOXA6P31267 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HOXA6P31267 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
HOXA6P31267 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HOXA6P31267 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HOXA6P31267 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.64■□□□□ 0.89
HOXA6P31267 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
HOXA6P31267 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.64■□□□□ 0.89
HOXA6P31267 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.64■□□□□ 0.89
HOXA6P31267 AC005829.2-201ENST00000571422 1056 ntBASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms