Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
CD40P25942 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CD40P25942 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CD40P25942 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CD40P25942 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CD40P25942 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC17.9■□□□□ 0.46
CD40P25942 AC244015.2-201ENST00000616358 1861 ntBASIC17.9■□□□□ 0.46
CD40P25942 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CD40P25942 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CD40P25942 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CD40P25942 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CD40P25942 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CD40P25942 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.9■□□□□ 0.46
CD40P25942 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.9■□□□□ 0.46
CD40P25942 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.9■□□□□ 0.46
CD40P25942 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.9■□□□□ 0.46
CD40P25942 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CD40P25942 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC17.9■□□□□ 0.46
CD40P25942 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CD40P25942 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CD40P25942 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CD40P25942 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CD40P25942 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CD40P25942 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CD40P25942 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CD40P25942 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC17.9■□□□□ 0.46
CD40P25942 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CD40P25942 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.46
CD40P25942 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CD40P25942 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
CD40P25942 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.89■□□□□ 0.45
CD40P25942 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CD40P25942 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.89■□□□□ 0.45
CD40P25942 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
CD40P25942 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CD40P25942 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CD40P25942 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CD40P25942 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.89■□□□□ 0.45
CD40P25942 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.89■□□□□ 0.45
CD40P25942 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CD40P25942 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC17.89■□□□□ 0.45
CD40P25942 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.89■□□□□ 0.45
CD40P25942 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC17.89■□□□□ 0.45
CD40P25942 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC17.89■□□□□ 0.45
CD40P25942 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CD40P25942 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CD40P25942 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CD40P25942 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CD40P25942 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CD40P25942 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CD40P25942 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CD40P25942 AC116050.2-201ENST00000612102 1779 ntBASIC17.89■□□□□ 0.45
CD40P25942 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CD40P25942 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CD40P25942 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
CD40P25942 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CD40P25942 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC17.88■□□□□ 0.45
CD40P25942 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CD40P25942 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CD40P25942 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CD40P25942 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CD40P25942 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CD40P25942 LSM12P1-201ENST00000411836 588 ntBASIC17.88■□□□□ 0.45
CD40P25942 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC17.88■□□□□ 0.45
CD40P25942 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC17.88■□□□□ 0.45
CD40P25942 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CD40P25942 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.88■□□□□ 0.45
CD40P25942 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CD40P25942 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC17.88■□□□□ 0.45
CD40P25942 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
CD40P25942 FBXW4P1-201ENST00000426721 2239 ntBASIC17.88■□□□□ 0.45
CD40P25942 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CD40P25942 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CD40P25942 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CD40P25942 DYM-203ENST00000442713 2147 ntTSL 2 BASIC17.87■□□□□ 0.45
CD40P25942 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CD40P25942 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CD40P25942 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CD40P25942 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC17.87■□□□□ 0.45
CD40P25942 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC17.87■□□□□ 0.45
CD40P25942 MCRIP2P1-201ENST00000394346 511 ntBASIC17.87■□□□□ 0.45
CD40P25942 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CD40P25942 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CD40P25942 AL355472.2-201ENST00000422958 438 ntBASIC17.87■□□□□ 0.45
CD40P25942 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.87■□□□□ 0.45
CD40P25942 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.87■□□□□ 0.45
CD40P25942 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CD40P25942 CYP2T3P-201ENST00000601990 817 ntBASIC17.87■□□□□ 0.45
CD40P25942 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CD40P25942 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CD40P25942 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC17.87■□□□□ 0.45
CD40P25942 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CD40P25942 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
CD40P25942 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CD40P25942 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CD40P25942 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CD40P25942 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC17.87■□□□□ 0.45
CD40P25942 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC17.86■□□□□ 0.45
CD40P25942 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
CD40P25942 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms