Protein–RNA interactions for Protein: P18898

CDC43, Geranylgeranyl transferase type-1 subunit beta, yeastyeast

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC43P18898 SIP1YDR422C 2448 nt3.25□□□□□ -1.89
CDC43P18898 BEM4YPL161C 1902 nt3.25□□□□□ -1.89
CDC43P18898 GPI8YDR331W 1236 nt3.25□□□□□ -1.89
CDC43P18898 RPL1BYGL135W 654 nt3.25□□□□□ -1.89
CDC43P18898 tW(UCA)QtW(UCA)Q 74 nt3.25□□□□□ -1.89
CDC43P18898 YLR031WYLR031W 561 nt3.25□□□□□ -1.89
CDC43P18898 YLR230WYLR230W 306 nt3.25□□□□□ -1.89
CDC43P18898 RPL19BYBL027W 570 nt3.25□□□□□ -1.89
CDC43P18898 YOL114CYOL114C 609 nt3.25□□□□□ -1.89
CDC43P18898 RPL18AYOL120C 561 nt3.25□□□□□ -1.89
CDC43P18898 RPL1AYPL220W 654 nt3.25□□□□□ -1.89
CDC43P18898 TDA1YMR291W 1761 nt3.25□□□□□ -1.89
CDC43P18898 IRC3YDR332W 2070 nt3.24□□□□□ -1.89
CDC43P18898 APC4YDR118W 1959 nt3.24□□□□□ -1.89
CDC43P18898 MIP6YHR015W 1980 nt3.24□□□□□ -1.89
CDC43P18898 PRO3YER023W 861 nt3.24□□□□□ -1.89
CDC43P18898 tM(CAU)Q1tM(CAU)Q1 76 nt3.24□□□□□ -1.89
CDC43P18898 SGN1YIR001C 753 nt3.24□□□□□ -1.89
CDC43P18898 SWC7YLR385C 399 nt3.24□□□□□ -1.89
CDC43P18898 SIP18YMR175W 240 nt3.24□□□□□ -1.89
CDC43P18898 HHF2YNL030W 312 nt3.24□□□□□ -1.89
CDC43P18898 HHT2YNL031C 411 nt3.24□□□□□ -1.89
CDC43P18898 YOL085W-AYOL085W-A 213 nt3.24□□□□□ -1.89
CDC43P18898 YPL152W-AYPL152W-A 99 nt3.24□□□□□ -1.89
CDC43P18898 snR36snR36 182 nt3.24□□□□□ -1.89
CDC43P18898 DIE2YGR227W 1578 nt3.24□□□□□ -1.89
CDC43P18898 SKN7YHR206W 1869 nt3.24□□□□□ -1.89
CDC43P18898 ADP1YCR011C 3150 nt3.24□□□□□ -1.89
CDC43P18898 AIM21YIR003W 2040 nt3.24□□□□□ -1.89
CDC43P18898 SRP68YPL243W 1800 nt3.23□□□□□ -1.89
CDC43P18898 YDL180WYDL180W 1644 nt3.23□□□□□ -1.89
CDC43P18898 SRP72YPL210C 1923 nt3.23□□□□□ -1.89
CDC43P18898 YJR030CYJR030C 2238 nt3.23□□□□□ -1.89
CDC43P18898 YEL018C-AYEL018C-A 534 nt3.23□□□□□ -1.89
CDC43P18898 LSO1YJR005C-A 282 nt3.23□□□□□ -1.89
CDC43P18898 MCD4YKL165C 2760 nt3.23□□□□□ -1.89
CDC43P18898 PRM15YMR278W 1869 nt3.23□□□□□ -1.89
CDC43P18898 DGK1YOR311C 873 nt3.23□□□□□ -1.89
CDC43P18898 PMT6YGR199W 2280 nt3.22□□□□□ -1.89
CDC43P18898 Q0092Q0092 141 nt3.22□□□□□ -1.89
CDC43P18898 YEL075CYEL075C 369 nt3.22□□□□□ -1.89
CDC43P18898 YJL202CYJL202C 348 nt3.22□□□□□ -1.89
CDC43P18898 PET191YJR034W 327 nt3.22□□□□□ -1.89
CDC43P18898 GTT2YLL060C 702 nt3.22□□□□□ -1.89
CDC43P18898 APS1YLR170C 471 nt3.22□□□□□ -1.89
CDC43P18898 OST6YML019W 999 nt3.22□□□□□ -1.89
CDC43P18898 INN1YNL152W 1230 nt3.22□□□□□ -1.89
CDC43P18898 BRE4YDL231C 3378 nt3.22□□□□□ -1.89
CDC43P18898 NIC96YFR002W 2520 nt3.22□□□□□ -1.89
CDC43P18898 MCM7YBR202W 2538 nt3.22□□□□□ -1.89
CDC43P18898 SPC72YAL047C 1869 nt3.22□□□□□ -1.89
CDC43P18898 PEX5YDR244W 1839 nt3.21□□□□□ -1.89
CDC43P18898 YDR338CYDR338C 2088 nt3.21□□□□□ -1.89
CDC43P18898 KRI1YNL308C 1776 nt3.21□□□□□ -1.9
CDC43P18898 YER107W-AYER107W-A 321 nt3.21□□□□□ -1.9
CDC43P18898 YGL194C-AYGL194C-A 243 nt3.21□□□□□ -1.9
CDC43P18898 RPL39YJL189W 156 nt3.21□□□□□ -1.9
CDC43P18898 TIR2YOR010C 756 nt3.21□□□□□ -1.9
CDC43P18898 PFY1YOR122C 381 nt3.21□□□□□ -1.9
CDC43P18898 FEX1YOR390W 1128 nt3.21□□□□□ -1.9
CDC43P18898 YAP1802YGR241C 1707 nt3.21□□□□□ -1.9
CDC43P18898 MED1YPR070W 1701 nt3.21□□□□□ -1.9
CDC43P18898 MLH2YLR035C 2088 nt3.21□□□□□ -1.9
CDC43P18898 IMD4YML056C 1575 nt3.21□□□□□ -1.9
CDC43P18898 GDH2YDL215C 3279 nt3.2□□□□□ -1.9
CDC43P18898 HSP30YCR021C 999 nt3.2□□□□□ -1.9
CDC43P18898 YDL094CYDL094C 510 nt3.2□□□□□ -1.9
CDC43P18898 SNA2YDR525W-A 240 nt3.2□□□□□ -1.9
CDC43P18898 SPI1YER150W 447 nt3.2□□□□□ -1.9
CDC43P18898 YHR007C-AYHR007C-A 216 nt3.2□□□□□ -1.9
CDC43P18898 LSM2YBL026W 288 nt3.2□□□□□ -1.9
CDC43P18898 ISF1YMR081C 1017 nt3.2□□□□□ -1.9
CDC43P18898 SSN8YNL025C 972 nt3.2□□□□□ -1.9
CDC43P18898 ALR2YFL050C 2577 nt3.2□□□□□ -1.9
CDC43P18898 SWH1YAR042W 3567 nt3.19□□□□□ -1.9
CDC43P18898 snR80snR80 171 nt3.19□□□□□ -1.9
CDC43P18898 ARF1YDL192W 546 nt3.19□□□□□ -1.9
CDC43P18898 YDR183C-AYDR183C-A 258 nt3.19□□□□□ -1.9
CDC43P18898 CAJ1YER048C 1176 nt3.19□□□□□ -1.9
CDC43P18898 RPS7BYNL096C 573 nt3.19□□□□□ -1.9
CDC43P18898 YNL198CYNL198C 303 nt3.19□□□□□ -1.9
CDC43P18898 YPL238CYPL238C 390 nt3.19□□□□□ -1.9
CDC43P18898 UTP25YIL091C 2166 nt3.19□□□□□ -1.9
CDC43P18898 NUP159YIL115C 4383 nt3.18□□□□□ -1.9
CDC43P18898 RRT13YER066W 558 nt3.18□□□□□ -1.9
CDC43P18898 YHR214W-AYHR214W-A 486 nt3.18□□□□□ -1.9
CDC43P18898 YKL033W-AYKL033W-A 711 nt3.18□□□□□ -1.9
CDC43P18898 YAR068WYAR068W 486 nt3.18□□□□□ -1.9
CDC43P18898 BIL1YOR304C-A 231 nt3.18□□□□□ -1.9
CDC43P18898 SSO1YPL232W 873 nt3.18□□□□□ -1.9
CDC43P18898 RPO21YDL140C 5202 nt3.18□□□□□ -1.9
CDC43P18898 BUD5YCR038C 1929 nt3.18□□□□□ -1.9
CDC43P18898 ELM1YKL048C 1923 nt3.18□□□□□ -1.9
CDC43P18898 JHD2YJR119C 2187 nt3.18□□□□□ -1.9
CDC43P18898 CBP2YHL038C 1893 nt3.18□□□□□ -1.9
CDC43P18898 CEP3YMR168C 1827 nt3.17□□□□□ -1.9
CDC43P18898 VIP1YLR410W 3441 nt3.17□□□□□ -1.9
CDC43P18898 YCR081C-AYCR081C-A 237 nt3.17□□□□□ -1.9
CDC43P18898 JAC1YGL018C 555 nt3.17□□□□□ -1.9
CDC43P18898 YIL012WYIL012W 342 nt3.17□□□□□ -1.9
Retrieved 100 of 7,029 protein–RNA pairs in 34.9 ms