Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SP9P0CG40 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SP9P0CG40 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.7■□□□□ 0.9
SP9P0CG40 RNF146-204ENST00000476956 884 ntTSL 2 BASIC20.7■□□□□ 0.9
SP9P0CG40 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.7■□□□□ 0.9
SP9P0CG40 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SP9P0CG40 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
SP9P0CG40 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SP9P0CG40 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SP9P0CG40 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.69■□□□□ 0.9
SP9P0CG40 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
SP9P0CG40 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SP9P0CG40 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
SP9P0CG40 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SP9P0CG40 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SP9P0CG40 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
SP9P0CG40 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SP9P0CG40 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SP9P0CG40 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SP9P0CG40 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SP9P0CG40 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
SP9P0CG40 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.69■□□□□ 0.9
SP9P0CG40 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SP9P0CG40 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SP9P0CG40 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.69■□□□□ 0.9
SP9P0CG40 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SP9P0CG40 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC20.69■□□□□ 0.9
SP9P0CG40 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.69■□□□□ 0.9
SP9P0CG40 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
SP9P0CG40 AC003102.1-202ENST00000563394 1796 ntBASIC20.69■□□□□ 0.9
SP9P0CG40 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.68■□□□□ 0.9
SP9P0CG40 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.68■□□□□ 0.9
SP9P0CG40 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SP9P0CG40 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SP9P0CG40 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SP9P0CG40 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.68■□□□□ 0.9
SP9P0CG40 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC20.68■□□□□ 0.9
SP9P0CG40 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.68■□□□□ 0.9
SP9P0CG40 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SP9P0CG40 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
SP9P0CG40 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SP9P0CG40 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SP9P0CG40 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SP9P0CG40 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SP9P0CG40 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.67■□□□□ 0.9
SP9P0CG40 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
SP9P0CG40 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
SP9P0CG40 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SP9P0CG40 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
SP9P0CG40 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.67■□□□□ 0.9
SP9P0CG40 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.67■□□□□ 0.9
SP9P0CG40 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
SP9P0CG40 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
SP9P0CG40 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SP9P0CG40 AC005363.2-201ENST00000618631 242 ntBASIC20.67■□□□□ 0.9
SP9P0CG40 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SP9P0CG40 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SP9P0CG40 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SP9P0CG40 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.67■□□□□ 0.9
SP9P0CG40 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SP9P0CG40 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SP9P0CG40 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SP9P0CG40 AL355355.2-201ENST00000442321 338 ntBASIC20.66■□□□□ 0.9
SP9P0CG40 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.66■□□□□ 0.9
SP9P0CG40 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SP9P0CG40 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.66■□□□□ 0.9
SP9P0CG40 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SP9P0CG40 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SP9P0CG40 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SP9P0CG40 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
SP9P0CG40 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SP9P0CG40 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.65■□□□□ 0.9
SP9P0CG40 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SP9P0CG40 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SP9P0CG40 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.65■□□□□ 0.9
SP9P0CG40 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SP9P0CG40 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SP9P0CG40 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.65■□□□□ 0.9
SP9P0CG40 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.65■□□□□ 0.9
SP9P0CG40 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC20.65■□□□□ 0.9
SP9P0CG40 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.65■□□□□ 0.9
SP9P0CG40 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.65■□□□□ 0.9
SP9P0CG40 P4HB-223ENST00000576390 439 ntTSL 4 BASIC20.65■□□□□ 0.9
SP9P0CG40 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.65■□□□□ 0.9
SP9P0CG40 AC145285.6-201ENST00000604632 637 ntBASIC20.65■□□□□ 0.9
SP9P0CG40 MIR6786-201ENST00000616843 113 ntBASIC20.65■□□□□ 0.9
SP9P0CG40 AC006557.6-201ENST00000623071 864 ntBASIC20.65■□□□□ 0.9
SP9P0CG40 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SP9P0CG40 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.65■□□□□ 0.9
SP9P0CG40 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.64■□□□□ 0.9
SP9P0CG40 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SP9P0CG40 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SP9P0CG40 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SP9P0CG40 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.64■□□□□ 0.89
SP9P0CG40 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC20.64■□□□□ 0.89
SP9P0CG40 NME3-204ENST00000563498 920 ntTSL 2 BASIC20.64■□□□□ 0.89
SP9P0CG40 WDR88-203ENST00000592765 651 ntTSL 5 BASIC20.64■□□□□ 0.89
SP9P0CG40 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
SP9P0CG40 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.64■□□□□ 0.89
SP9P0CG40 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms