Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.32■□□□□ 0.52
ERCC1P07992 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.32■□□□□ 0.52
ERCC1P07992 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ERCC1P07992 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ERCC1P07992 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ERCC1P07992 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
ERCC1P07992 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ERCC1P07992 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ERCC1P07992 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ERCC1P07992 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ERCC1P07992 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
ERCC1P07992 AP004607.7-201ENST00000527152 1677 ntBASIC18.31■□□□□ 0.52
ERCC1P07992 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ERCC1P07992 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ERCC1P07992 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.31■□□□□ 0.52
ERCC1P07992 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ERCC1P07992 AIRN-201ENST00000601203 4374 ntBASIC18.31■□□□□ 0.52
ERCC1P07992 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
ERCC1P07992 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.31■□□□□ 0.52
ERCC1P07992 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.31■□□□□ 0.52
ERCC1P07992 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ERCC1P07992 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ERCC1P07992 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.31■□□□□ 0.52
ERCC1P07992 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ERCC1P07992 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.31■□□□□ 0.52
ERCC1P07992 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ERCC1P07992 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
ERCC1P07992 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ERCC1P07992 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ERCC1P07992 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ERCC1P07992 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ERCC1P07992 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ERCC1P07992 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ERCC1P07992 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ERCC1P07992 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ERCC1P07992 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ERCC1P07992 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ERCC1P07992 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ERCC1P07992 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.3■□□□□ 0.52
ERCC1P07992 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.3■□□□□ 0.52
ERCC1P07992 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ERCC1P07992 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ERCC1P07992 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.3■□□□□ 0.52
ERCC1P07992 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.3■□□□□ 0.52
ERCC1P07992 IKBKGP1-201ENST00000612193 1073 ntBASIC18.3■□□□□ 0.52
ERCC1P07992 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
ERCC1P07992 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
ERCC1P07992 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ERCC1P07992 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
ERCC1P07992 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.3■□□□□ 0.52
ERCC1P07992 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ERCC1P07992 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ERCC1P07992 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ERCC1P07992 AC005224.4-201ENST00000583262 1652 ntBASIC18.29■□□□□ 0.52
ERCC1P07992 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ERCC1P07992 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ERCC1P07992 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ERCC1P07992 AC004911.1-201ENST00000416316 871 ntBASIC18.29■□□□□ 0.52
ERCC1P07992 KRT18P11-201ENST00000435214 1283 ntBASIC18.29■□□□□ 0.52
ERCC1P07992 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.29■□□□□ 0.52
ERCC1P07992 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ERCC1P07992 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ERCC1P07992 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ERCC1P07992 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ERCC1P07992 LINC01521-201ENST00000504184 1943 ntBASIC18.29■□□□□ 0.52
ERCC1P07992 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ERCC1P07992 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ERCC1P07992 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.28■□□□□ 0.52
ERCC1P07992 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ERCC1P07992 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
ERCC1P07992 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ERCC1P07992 AL049796.1-201ENST00000565336 1766 ntBASIC18.28■□□□□ 0.52
ERCC1P07992 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ERCC1P07992 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ERCC1P07992 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ERCC1P07992 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.28■□□□□ 0.52
ERCC1P07992 RARRES2P11-201ENST00000635158 484 ntBASIC18.28■□□□□ 0.52
ERCC1P07992 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.28■□□□□ 0.52
ERCC1P07992 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ERCC1P07992 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ERCC1P07992 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ERCC1P07992 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ERCC1P07992 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.28■□□□□ 0.52
ERCC1P07992 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.28■□□□□ 0.52
ERCC1P07992 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ERCC1P07992 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ERCC1P07992 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ERCC1P07992 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ERCC1P07992 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ERCC1P07992 KRT87P-202ENST00000534226 1464 ntBASIC18.27■□□□□ 0.52
ERCC1P07992 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
ERCC1P07992 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
ERCC1P07992 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ERCC1P07992 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ERCC1P07992 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ERCC1P07992 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ERCC1P07992 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.27■□□□□ 0.52
ERCC1P07992 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.27■□□□□ 0.52
ERCC1P07992 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.27■□□□□ 0.52
ERCC1P07992 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms