Protein–RNA interactions for Protein: P06839

RAD3, General transcription and DNA repair factor IIH helicase subunit XPD, yeastyeast

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RAD3P06839 TRM82YDR165W 1335 nt2.36□□□□□ -2.03
RAD3P06839 BNI1YNL271C 5862 nt2.36□□□□□ -2.03
RAD3P06839 POM152YMR129W 4014 nt2.35□□□□□ -2.03
RAD3P06839 YIL080WYIL080W 4722 nt2.35□□□□□ -2.03
RAD3P06839 NEL1YHR035W 1893 nt2.35□□□□□ -2.03
RAD3P06839 AMS1YGL156W 3252 nt2.35□□□□□ -2.03
RAD3P06839 LSM4YER112W 564 nt2.35□□□□□ -2.03
RAD3P06839 ARG3YJL088W 1017 nt2.35□□□□□ -2.03
RAD3P06839 YKL065W-AYKL065W-A 222 nt2.35□□□□□ -2.03
RAD3P06839 ICY1YMR195W 384 nt2.35□□□□□ -2.03
RAD3P06839 FPR1YNL135C 345 nt2.35□□□□□ -2.03
RAD3P06839 NGL1YOL042W 1092 nt2.35□□□□□ -2.03
RAD3P06839 RGA1YOR127W 3024 nt2.35□□□□□ -2.03
RAD3P06839 RTG3YBL103C 1461 nt2.34□□□□□ -2.03
RAD3P06839 SAP185YJL098W 3177 nt2.34□□□□□ -2.03
RAD3P06839 YGL039WYGL039W 1047 nt2.34□□□□□ -2.03
RAD3P06839 MPC1YGL080W 393 nt2.34□□□□□ -2.03
RAD3P06839 CCE1YKL011C 1062 nt2.34□□□□□ -2.03
RAD3P06839 BOS1YLR078C 735 nt2.34□□□□□ -2.03
RAD3P06839 SLF1YDR515W 1344 nt2.34□□□□□ -2.04
RAD3P06839 SPB1YCL054W 2526 nt2.33□□□□□ -2.04
RAD3P06839 PLP1YDR183W 693 nt2.33□□□□□ -2.04
RAD3P06839 YFR054CYFR054C 579 nt2.33□□□□□ -2.04
RAD3P06839 YIL141WYIL141W 390 nt2.33□□□□□ -2.04
RAD3P06839 ATP7YKL016C 525 nt2.33□□□□□ -2.04
RAD3P06839 YLL044WYLL044W 447 nt2.33□□□□□ -2.04
RAD3P06839 FMP41YNL168C 780 nt2.33□□□□□ -2.04
RAD3P06839 RBL2YOR265W 321 nt2.33□□□□□ -2.04
RAD3P06839 YPL135C-AYPL135C-A 174 nt2.33□□□□□ -2.04
RAD3P06839 CBP6YBR120C 489 nt2.33□□□□□ -2.04
RAD3P06839 JJJ2YJL162C 1752 nt2.33□□□□□ -2.04
RAD3P06839 APC2YLR127C 2562 nt2.33□□□□□ -2.04
RAD3P06839 SWA2YDR320C 2007 nt2.32□□□□□ -2.04
RAD3P06839 BI3Q0115 1554 nt2.32□□□□□ -2.04
RAD3P06839 YFR016CYFR016C 3702 nt2.32□□□□□ -2.04
RAD3P06839 YER138W-AYER138W-A 105 nt2.32□□□□□ -2.04
RAD3P06839 SEC4YFL005W 648 nt2.32□□□□□ -2.04
RAD3P06839 RRF1YHR038W 693 nt2.32□□□□□ -2.04
RAD3P06839 MTG1YMR097C 1104 nt2.32□□□□□ -2.04
RAD3P06839 YBL107W-AYBL107W-A 105 nt2.32□□□□□ -2.04
RAD3P06839 NOP12YOL041C 1380 nt2.32□□□□□ -2.04
RAD3P06839 SPP41YDR464W 4308 nt2.32□□□□□ -2.04
RAD3P06839 DPP1YDR284C 870 nt2.31□□□□□ -2.04
RAD3P06839 TIF35YDR429C 825 nt2.31□□□□□ -2.04
RAD3P06839 CAJ1YER048C 1176 nt2.31□□□□□ -2.04
RAD3P06839 RPS24AYER074W 408 nt2.31□□□□□ -2.04
RAD3P06839 YAL042C-AYAL042C-A 378 nt2.31□□□□□ -2.04
RAD3P06839 YML090WYML090W 387 nt2.31□□□□□ -2.04
RAD3P06839 MER1YNL210W 813 nt2.31□□□□□ -2.04
RAD3P06839 UFE1YOR075W 1041 nt2.31□□□□□ -2.04
RAD3P06839 IRC13YOR235W 315 nt2.31□□□□□ -2.04
RAD3P06839 CCL1YPR025C 1182 nt2.31□□□□□ -2.04
RAD3P06839 UBS1YBR165W 834 nt2.31□□□□□ -2.04
RAD3P06839 SSY1YDR160W 2559 nt2.31□□□□□ -2.04
RAD3P06839 SDC25YLL016W 3147 nt2.31□□□□□ -2.04
RAD3P06839 TFC3YAL001C 3483 nt2.3□□□□□ -2.04
RAD3P06839 YHR022CYHR022C 771 nt2.3□□□□□ -2.04
RAD3P06839 YJL114WYJL114W 681 nt2.3□□□□□ -2.04
RAD3P06839 VPS25YJR102C 609 nt2.3□□□□□ -2.04
RAD3P06839 YRO2YBR054W 1035 nt2.3□□□□□ -2.04
RAD3P06839 RSA1YPL193W 1146 nt2.3□□□□□ -2.04
RAD3P06839 snR44snR44 211 nt2.3□□□□□ -2.04
RAD3P06839 MAK11YKL021C 1407 nt2.3□□□□□ -2.04
RAD3P06839 SSQ1YLR369W 1974 nt2.3□□□□□ -2.04
RAD3P06839 HSC82YMR186W 2118 nt2.3□□□□□ -2.04
RAD3P06839 SCH9YHR205W 2475 nt2.29□□□□□ -2.04
RAD3P06839 ELG1YOR144C 2376 nt2.29□□□□□ -2.04
RAD3P06839 AEP1YMR064W 1557 nt2.29□□□□□ -2.04
RAD3P06839 UBC9YDL064W 474 nt2.29□□□□□ -2.04
RAD3P06839 MEI4YER044C-A 1227 nt2.29□□□□□ -2.04
RAD3P06839 YFL015CYFL015C 495 nt2.29□□□□□ -2.04
RAD3P06839 YGR050CYGR050C 357 nt2.29□□□□□ -2.04
RAD3P06839 YHR071C-AYHR071C-A 321 nt2.29□□□□□ -2.04
RAD3P06839 YIL012WYIL012W 342 nt2.29□□□□□ -2.04
RAD3P06839 YLR169WYLR169W 354 nt2.29□□□□□ -2.04
RAD3P06839 DYN3YMR299C 939 nt2.29□□□□□ -2.04
RAD3P06839 snR191snR191 274 nt2.29□□□□□ -2.04
RAD3P06839 ART10YLR392C 1557 nt2.28□□□□□ -2.04
RAD3P06839 COG7YGL005C 840 nt2.28□□□□□ -2.04
RAD3P06839 YGL204CYGL204C 306 nt2.28□□□□□ -2.04
RAD3P06839 HTD2YHR067W 843 nt2.28□□□□□ -2.04
RAD3P06839 YIR018C-AYIR018C-A 138 nt2.28□□□□□ -2.04
RAD3P06839 YKL131WYKL131W 522 nt2.28□□□□□ -2.04
RAD3P06839 YLR255CYLR255C 354 nt2.28□□□□□ -2.04
RAD3P06839 VAM3YOR106W 852 nt2.28□□□□□ -2.04
RAD3P06839 MRPL40YPL173W 894 nt2.28□□□□□ -2.04
RAD3P06839 RFC5YBR087W 1065 nt2.28□□□□□ -2.04
RAD3P06839 UFD4YKL010C 4452 nt2.28□□□□□ -2.04
RAD3P06839 YNL018CYNL018C 1839 nt2.28□□□□□ -2.04
RAD3P06839 YMR31YFR049W 372 nt2.27□□□□□ -2.05
RAD3P06839 COG2YGR120C 789 nt2.27□□□□□ -2.05
RAD3P06839 DGR1YNL130C-A 147 nt2.27□□□□□ -2.05
RAD3P06839 FYV6YNL133C 522 nt2.27□□□□□ -2.05
RAD3P06839 ATG19YOL082W 1248 nt2.27□□□□□ -2.05
RAD3P06839 CRS5YOR031W 210 nt2.27□□□□□ -2.05
RAD3P06839 YBR013CYBR013C 390 nt2.27□□□□□ -2.05
RAD3P06839 FKS1YLR342W 5631 nt2.27□□□□□ -2.05
RAD3P06839 TOR2YKL203C 7425 nt2.26□□□□□ -2.05
RAD3P06839 SCY1YGL083W 2415 nt2.26□□□□□ -2.05
RAD3P06839 EDS1YBR033W 2760 nt2.26□□□□□ -2.05
Retrieved 100 of 7,029 protein–RNA pairs in 28.5 ms