Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VAPBO95292 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
VAPBO95292 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
VAPBO95292 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
VAPBO95292 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
VAPBO95292 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
VAPBO95292 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.8■□□□□ 0.92
VAPBO95292 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VAPBO95292 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.8■□□□□ 0.92
VAPBO95292 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.8■□□□□ 0.92
VAPBO95292 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.8■□□□□ 0.92
VAPBO95292 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
VAPBO95292 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
VAPBO95292 AC010141.2-201ENST00000452426 721 ntBASIC20.8■□□□□ 0.92
VAPBO95292 KRT18P14-201ENST00000534205 1250 ntBASIC20.8■□□□□ 0.92
VAPBO95292 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.8■□□□□ 0.92
VAPBO95292 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.8■□□□□ 0.92
VAPBO95292 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.8■□□□□ 0.92
VAPBO95292 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VAPBO95292 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
VAPBO95292 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VAPBO95292 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.8■□□□□ 0.92
VAPBO95292 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
VAPBO95292 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VAPBO95292 FEM1AP1-201ENST00000431297 1995 ntBASIC20.79■□□□□ 0.92
VAPBO95292 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
VAPBO95292 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
VAPBO95292 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
VAPBO95292 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.79■□□□□ 0.92
VAPBO95292 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.79■□□□□ 0.92
VAPBO95292 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
VAPBO95292 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.79■□□□□ 0.92
VAPBO95292 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
VAPBO95292 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.79■□□□□ 0.92
VAPBO95292 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
VAPBO95292 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
VAPBO95292 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
VAPBO95292 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
VAPBO95292 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VAPBO95292 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VAPBO95292 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VAPBO95292 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VAPBO95292 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
VAPBO95292 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VAPBO95292 LINC01006-201ENST00000333319 2292 ntBASIC20.78■□□□□ 0.92
VAPBO95292 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
VAPBO95292 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
VAPBO95292 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
VAPBO95292 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VAPBO95292 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.78■□□□□ 0.92
VAPBO95292 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
VAPBO95292 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.78■□□□□ 0.92
VAPBO95292 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.78■□□□□ 0.92
VAPBO95292 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
VAPBO95292 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
VAPBO95292 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.78■□□□□ 0.92
VAPBO95292 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.77■□□□□ 0.92
VAPBO95292 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.77■□□□□ 0.92
VAPBO95292 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
VAPBO95292 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
VAPBO95292 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.77■□□□□ 0.92
VAPBO95292 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.77■□□□□ 0.92
VAPBO95292 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
VAPBO95292 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.77■□□□□ 0.92
VAPBO95292 DUX4L2-201ENST00000561772 1275 ntBASIC20.77■□□□□ 0.92
VAPBO95292 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.77■□□□□ 0.92
VAPBO95292 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.77■□□□□ 0.92
VAPBO95292 AP001160.3-201ENST00000601484 763 ntBASIC20.77■□□□□ 0.92
VAPBO95292 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.77■□□□□ 0.92
VAPBO95292 DUX4L6-201ENST00000626483 1275 ntBASIC20.77■□□□□ 0.92
VAPBO95292 DUX4L1-201ENST00000627662 1275 ntBASIC20.77■□□□□ 0.92
VAPBO95292 DUX4L8-201ENST00000629013 1275 ntBASIC20.77■□□□□ 0.92
VAPBO95292 DUX4L3-201ENST00000630187 1275 ntBASIC20.77■□□□□ 0.92
VAPBO95292 DUX4L7-201ENST00000630678 1275 ntBASIC20.77■□□□□ 0.92
VAPBO95292 DUX4L5-201ENST00000630834 1275 ntBASIC20.77■□□□□ 0.92
VAPBO95292 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
VAPBO95292 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.77■□□□□ 0.92
VAPBO95292 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
VAPBO95292 KRT16P2-201ENST00000414673 1423 ntBASIC20.77■□□□□ 0.91
VAPBO95292 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
VAPBO95292 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
VAPBO95292 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
VAPBO95292 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
VAPBO95292 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
VAPBO95292 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
VAPBO95292 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
VAPBO95292 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
VAPBO95292 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
VAPBO95292 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
VAPBO95292 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
VAPBO95292 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
VAPBO95292 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.76■□□□□ 0.91
VAPBO95292 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
VAPBO95292 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.76■□□□□ 0.91
VAPBO95292 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
VAPBO95292 AC120498.10-201ENST00000621827 505 ntBASIC20.76■□□□□ 0.91
VAPBO95292 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.76■□□□□ 0.91
VAPBO95292 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.76■□□□□ 0.91
VAPBO95292 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
VAPBO95292 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms