Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
SCAF4O95104 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC16.9■□□□□ 0.3
SCAF4O95104 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCAF4O95104 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCAF4O95104 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCAF4O95104 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
SCAF4O95104 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC16.89■□□□□ 0.3
SCAF4O95104 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SCAF4O95104 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC16.89■□□□□ 0.29
SCAF4O95104 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SCAF4O95104 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.89■□□□□ 0.29
SCAF4O95104 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC16.89■□□□□ 0.29
SCAF4O95104 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SCAF4O95104 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SCAF4O95104 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SCAF4O95104 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SCAF4O95104 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SCAF4O95104 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC16.89■□□□□ 0.29
SCAF4O95104 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
SCAF4O95104 AL020996.1-203ENST00000536896 2307 ntBASIC16.89■□□□□ 0.29
SCAF4O95104 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC16.89■□□□□ 0.29
SCAF4O95104 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SCAF4O95104 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SCAF4O95104 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
SCAF4O95104 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.89■□□□□ 0.29
SCAF4O95104 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SCAF4O95104 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SCAF4O95104 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC16.88■□□□□ 0.29
SCAF4O95104 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SCAF4O95104 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC16.88■□□□□ 0.29
SCAF4O95104 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC16.88■□□□□ 0.29
SCAF4O95104 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
SCAF4O95104 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SCAF4O95104 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC16.88■□□□□ 0.29
SCAF4O95104 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SCAF4O95104 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SCAF4O95104 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SCAF4O95104 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SCAF4O95104 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC16.88■□□□□ 0.29
SCAF4O95104 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SCAF4O95104 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SCAF4O95104 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC16.88■□□□□ 0.29
SCAF4O95104 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SCAF4O95104 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SCAF4O95104 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC16.88■□□□□ 0.29
SCAF4O95104 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC16.88■□□□□ 0.29
SCAF4O95104 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC16.88■□□□□ 0.29
SCAF4O95104 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC16.88■□□□□ 0.29
SCAF4O95104 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SCAF4O95104 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC16.88■□□□□ 0.29
SCAF4O95104 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SCAF4O95104 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC16.88■□□□□ 0.29
SCAF4O95104 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SCAF4O95104 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC16.88■□□□□ 0.29
SCAF4O95104 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SCAF4O95104 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SCAF4O95104 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.87■□□□□ 0.29
SCAF4O95104 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SCAF4O95104 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SCAF4O95104 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
SCAF4O95104 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
SCAF4O95104 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC16.87■□□□□ 0.29
SCAF4O95104 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SCAF4O95104 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SCAF4O95104 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SCAF4O95104 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SCAF4O95104 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SCAF4O95104 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
SCAF4O95104 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
SCAF4O95104 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SCAF4O95104 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
SCAF4O95104 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SCAF4O95104 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SCAF4O95104 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SCAF4O95104 AC133637.1-201ENST00000624115 1537 ntBASIC16.86■□□□□ 0.29
SCAF4O95104 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SCAF4O95104 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SCAF4O95104 AC087289.5-201ENST00000586076 3175 ntBASIC16.86■□□□□ 0.29
SCAF4O95104 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
SCAF4O95104 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SCAF4O95104 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
SCAF4O95104 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SCAF4O95104 NALT1-201ENST00000429224 738 ntTSL 5 BASIC16.86■□□□□ 0.29
SCAF4O95104 AC096631.2-201ENST00000436136 790 ntBASIC16.86■□□□□ 0.29
SCAF4O95104 AC092171.4-201ENST00000609130 632 ntBASIC16.86■□□□□ 0.29
SCAF4O95104 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
SCAF4O95104 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC16.86■□□□□ 0.29
SCAF4O95104 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC16.86■□□□□ 0.29
SCAF4O95104 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SCAF4O95104 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SCAF4O95104 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC16.86■□□□□ 0.29
SCAF4O95104 AC026471.6-201ENST00000622954 1905 ntBASIC16.86■□□□□ 0.29
SCAF4O95104 AFG3L1P-217ENST00000557444 2447 ntBASIC16.86■□□□□ 0.29
SCAF4O95104 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SCAF4O95104 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SCAF4O95104 GTSE1-AS1-202ENST00000623117 1518 ntBASIC16.86■□□□□ 0.29
SCAF4O95104 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC16.85■□□□□ 0.29
SCAF4O95104 AC006128.1-201ENST00000624704 1661 ntBASIC16.85■□□□□ 0.29
SCAF4O95104 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC16.85■□□□□ 0.29
SCAF4O95104 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms