Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM3O75382 AC026310.3-201ENST00000625186 2373 ntBASIC19.28■□□□□ 0.68
TRIM3O75382 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM3O75382 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM3O75382 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM3O75382 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM3O75382 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM3O75382 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM3O75382 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.27■□□□□ 0.68
TRIM3O75382 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.27■□□□□ 0.68
TRIM3O75382 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
TRIM3O75382 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.27■□□□□ 0.68
TRIM3O75382 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.27■□□□□ 0.68
TRIM3O75382 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.27■□□□□ 0.68
TRIM3O75382 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.27■□□□□ 0.68
TRIM3O75382 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.27■□□□□ 0.68
TRIM3O75382 MFSD11-216ENST00000590393 1141 ntBASIC19.27■□□□□ 0.68
TRIM3O75382 MYCNOS-205ENST00000641950 531 ntBASIC19.27■□□□□ 0.68
TRIM3O75382 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
TRIM3O75382 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.27■□□□□ 0.68
TRIM3O75382 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM3O75382 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM3O75382 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM3O75382 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM3O75382 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM3O75382 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.26■□□□□ 0.67
TRIM3O75382 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
TRIM3O75382 RAP2CP1-201ENST00000605103 478 ntBASIC19.26■□□□□ 0.67
TRIM3O75382 AC073111.5-205ENST00000641717 521 ntBASIC19.26■□□□□ 0.67
TRIM3O75382 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM3O75382 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
TRIM3O75382 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM3O75382 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.26■□□□□ 0.67
TRIM3O75382 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM3O75382 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM3O75382 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM3O75382 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM3O75382 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
TRIM3O75382 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
TRIM3O75382 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM3O75382 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.25■□□□□ 0.67
TRIM3O75382 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
TRIM3O75382 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM3O75382 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
TRIM3O75382 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.25■□□□□ 0.67
TRIM3O75382 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.25■□□□□ 0.67
TRIM3O75382 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM3O75382 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM3O75382 CDCA4P2-201ENST00000441182 718 ntBASIC19.25■□□□□ 0.67
TRIM3O75382 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.25■□□□□ 0.67
TRIM3O75382 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM3O75382 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM3O75382 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM3O75382 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM3O75382 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM3O75382 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.25■□□□□ 0.67
TRIM3O75382 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM3O75382 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
TRIM3O75382 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM3O75382 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.24■□□□□ 0.67
TRIM3O75382 AC244015.2-201ENST00000616358 1861 ntBASIC19.24■□□□□ 0.67
TRIM3O75382 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM3O75382 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
TRIM3O75382 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM3O75382 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.24■□□□□ 0.67
TRIM3O75382 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.24■□□□□ 0.67
TRIM3O75382 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM3O75382 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.24■□□□□ 0.67
TRIM3O75382 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.24■□□□□ 0.67
TRIM3O75382 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.24■□□□□ 0.67
TRIM3O75382 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.24■□□□□ 0.67
TRIM3O75382 SLC7A5P1-201ENST00000568957 537 ntBASIC19.24■□□□□ 0.67
TRIM3O75382 AC008175.2-201ENST00000612840 297 ntBASIC19.24■□□□□ 0.67
TRIM3O75382 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.24■□□□□ 0.67
TRIM3O75382 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM3O75382 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM3O75382 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM3O75382 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
TRIM3O75382 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM3O75382 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM3O75382 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRIM3O75382 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.24■□□□□ 0.67
TRIM3O75382 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM3O75382 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM3O75382 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM3O75382 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.23■□□□□ 0.67
TRIM3O75382 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.23■□□□□ 0.67
TRIM3O75382 POU5F1P4-201ENST00000413175 1085 ntBASIC19.23■□□□□ 0.67
TRIM3O75382 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.23■□□□□ 0.67
TRIM3O75382 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM3O75382 SLC7A5P2-201ENST00000553010 536 ntBASIC19.23■□□□□ 0.67
TRIM3O75382 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
TRIM3O75382 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM3O75382 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM3O75382 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
TRIM3O75382 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM3O75382 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
TRIM3O75382 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRIM3O75382 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM3O75382 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms