Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
KLHL41O60662 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KLHL41O60662 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
KLHL41O60662 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
KLHL41O60662 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.49■□□□□ 0.87
KLHL41O60662 DUX4L2-201ENST00000561772 1275 ntBASIC20.49■□□□□ 0.87
KLHL41O60662 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.49■□□□□ 0.87
KLHL41O60662 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.49■□□□□ 0.87
KLHL41O60662 DUX4L6-201ENST00000626483 1275 ntBASIC20.49■□□□□ 0.87
KLHL41O60662 DUX4L1-201ENST00000627662 1275 ntBASIC20.49■□□□□ 0.87
KLHL41O60662 DUX4L8-201ENST00000629013 1275 ntBASIC20.49■□□□□ 0.87
KLHL41O60662 DUX4L3-201ENST00000630187 1275 ntBASIC20.49■□□□□ 0.87
KLHL41O60662 DUX4L7-201ENST00000630678 1275 ntBASIC20.49■□□□□ 0.87
KLHL41O60662 DUX4L5-201ENST00000630834 1275 ntBASIC20.49■□□□□ 0.87
KLHL41O60662 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
KLHL41O60662 PCDHAC2-203ENST00000615316 3011 ntBASIC20.49■□□□□ 0.87
KLHL41O60662 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
KLHL41O60662 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
KLHL41O60662 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
KLHL41O60662 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.48■□□□□ 0.87
KLHL41O60662 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.48■□□□□ 0.87
KLHL41O60662 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KLHL41O60662 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
KLHL41O60662 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
KLHL41O60662 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
KLHL41O60662 AC073314.1-201ENST00000568729 2216 ntBASIC20.48■□□□□ 0.87
KLHL41O60662 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.48■□□□□ 0.87
KLHL41O60662 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.48■□□□□ 0.87
KLHL41O60662 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.48■□□□□ 0.87
KLHL41O60662 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
KLHL41O60662 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
KLHL41O60662 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.48■□□□□ 0.87
KLHL41O60662 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.48■□□□□ 0.87
KLHL41O60662 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
KLHL41O60662 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.48■□□□□ 0.87
KLHL41O60662 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
KLHL41O60662 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
KLHL41O60662 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
KLHL41O60662 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
KLHL41O60662 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
KLHL41O60662 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
KLHL41O60662 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
KLHL41O60662 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.47■□□□□ 0.87
KLHL41O60662 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
KLHL41O60662 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.47■□□□□ 0.87
KLHL41O60662 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.47■□□□□ 0.87
KLHL41O60662 RARRES2P11-201ENST00000635158 484 ntBASIC20.47■□□□□ 0.87
KLHL41O60662 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
KLHL41O60662 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.47■□□□□ 0.87
KLHL41O60662 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.47■□□□□ 0.87
KLHL41O60662 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
KLHL41O60662 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.47■□□□□ 0.87
KLHL41O60662 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
KLHL41O60662 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
KLHL41O60662 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.47■□□□□ 0.87
KLHL41O60662 AP005212.1-201ENST00000581547 1997 ntBASIC20.46■□□□□ 0.87
KLHL41O60662 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
KLHL41O60662 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
KLHL41O60662 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
KLHL41O60662 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.46■□□□□ 0.87
KLHL41O60662 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.46■□□□□ 0.87
KLHL41O60662 AL034346.1-201ENST00000568244 1277 ntBASIC20.46■□□□□ 0.87
KLHL41O60662 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
KLHL41O60662 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
KLHL41O60662 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
KLHL41O60662 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
KLHL41O60662 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.46■□□□□ 0.87
KLHL41O60662 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
KLHL41O60662 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.46■□□□□ 0.87
KLHL41O60662 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
KLHL41O60662 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
KLHL41O60662 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
KLHL41O60662 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
KLHL41O60662 GABARAPL3-202ENST00000624044 1851 ntBASIC20.45■□□□□ 0.86
KLHL41O60662 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
KLHL41O60662 AP004607.7-201ENST00000527152 1677 ntBASIC20.45■□□□□ 0.86
KLHL41O60662 AC006128.1-201ENST00000624704 1661 ntBASIC20.45■□□□□ 0.86
KLHL41O60662 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.45■□□□□ 0.86
KLHL41O60662 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
KLHL41O60662 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
KLHL41O60662 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
KLHL41O60662 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
KLHL41O60662 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.45■□□□□ 0.86
KLHL41O60662 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.45■□□□□ 0.86
KLHL41O60662 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
KLHL41O60662 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
KLHL41O60662 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
KLHL41O60662 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
KLHL41O60662 KRT18P14-201ENST00000534205 1250 ntBASIC20.45■□□□□ 0.86
KLHL41O60662 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
KLHL41O60662 CCDC92B-201ENST00000575506 885 ntBASIC20.45■□□□□ 0.86
KLHL41O60662 MIR6084-201ENST00000622012 110 ntBASIC20.45■□□□□ 0.86
KLHL41O60662 AC105233.4-201ENST00000642045 216 ntBASIC20.45■□□□□ 0.86
KLHL41O60662 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
KLHL41O60662 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.45■□□□□ 0.86
KLHL41O60662 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
KLHL41O60662 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
KLHL41O60662 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
KLHL41O60662 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
KLHL41O60662 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms