Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGA12O60330 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
PCDHGA12O60330 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.56■□□□□ 0.88
PCDHGA12O60330 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGA12O60330 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGA12O60330 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
PCDHGA12O60330 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHGA12O60330 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHGA12O60330 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHGA12O60330 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHGA12O60330 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.55■□□□□ 0.88
PCDHGA12O60330 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHGA12O60330 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHGA12O60330 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHGA12O60330 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHGA12O60330 AC026366.1-201ENST00000488803 879 ntBASIC20.55■□□□□ 0.88
PCDHGA12O60330 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.55■□□□□ 0.88
PCDHGA12O60330 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.55■□□□□ 0.88
PCDHGA12O60330 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHGA12O60330 AC087742.1-201ENST00000575880 1738 ntBASIC20.55■□□□□ 0.88
PCDHGA12O60330 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.55■□□□□ 0.88
PCDHGA12O60330 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHGA12O60330 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
PCDHGA12O60330 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHGA12O60330 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHGA12O60330 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHGA12O60330 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHGA12O60330 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGA12O60330 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
PCDHGA12O60330 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.54■□□□□ 0.88
PCDHGA12O60330 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGA12O60330 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.54■□□□□ 0.88
PCDHGA12O60330 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.54■□□□□ 0.88
PCDHGA12O60330 AL158047.1-201ENST00000445918 881 ntBASIC20.54■□□□□ 0.88
PCDHGA12O60330 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.54■□□□□ 0.88
PCDHGA12O60330 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
PCDHGA12O60330 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGA12O60330 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGA12O60330 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGA12O60330 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGA12O60330 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGA12O60330 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.54■□□□□ 0.88
PCDHGA12O60330 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHGA12O60330 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHGA12O60330 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHGA12O60330 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHGA12O60330 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.53■□□□□ 0.88
PCDHGA12O60330 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
PCDHGA12O60330 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHGA12O60330 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
PCDHGA12O60330 LSM12P1-201ENST00000411836 588 ntBASIC20.53■□□□□ 0.88
PCDHGA12O60330 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.53■□□□□ 0.88
PCDHGA12O60330 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.53■□□□□ 0.88
PCDHGA12O60330 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.53■□□□□ 0.88
PCDHGA12O60330 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.53■□□□□ 0.88
PCDHGA12O60330 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.53■□□□□ 0.88
PCDHGA12O60330 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.53■□□□□ 0.88
PCDHGA12O60330 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.53■□□□□ 0.88
PCDHGA12O60330 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.53■□□□□ 0.88
PCDHGA12O60330 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHGA12O60330 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.53■□□□□ 0.88
PCDHGA12O60330 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHGA12O60330 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.53■□□□□ 0.88
PCDHGA12O60330 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
PCDHGA12O60330 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.53■□□□□ 0.88
PCDHGA12O60330 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHGA12O60330 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHGA12O60330 AP003097.1-201ENST00000530657 1135 ntBASIC20.52■□□□□ 0.88
PCDHGA12O60330 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHGA12O60330 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHGA12O60330 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.52■□□□□ 0.88
PCDHGA12O60330 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
PCDHGA12O60330 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHGA12O60330 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHGA12O60330 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.52■□□□□ 0.87
PCDHGA12O60330 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGA12O60330 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGA12O60330 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
PCDHGA12O60330 AC061975.6-201ENST00000579045 1553 ntBASIC20.51■□□□□ 0.87
PCDHGA12O60330 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGA12O60330 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.51■□□□□ 0.87
PCDHGA12O60330 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGA12O60330 RPS2P4-201ENST00000476944 856 ntBASIC20.51■□□□□ 0.87
PCDHGA12O60330 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.51■□□□□ 0.87
PCDHGA12O60330 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGA12O60330 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGA12O60330 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGA12O60330 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
PCDHGA12O60330 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.5■□□□□ 0.87
PCDHGA12O60330 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGA12O60330 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGA12O60330 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
PCDHGA12O60330 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGA12O60330 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGA12O60330 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGA12O60330 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGA12O60330 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
PCDHGA12O60330 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGA12O60330 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGA12O60330 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms