Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 AC005229.4-201ENST00000610085 2198 ntBASIC19.93■□□□□ 0.78
SLC28A2O43868 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC28A2O43868 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.92■□□□□ 0.78
SLC28A2O43868 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC28A2O43868 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
SLC28A2O43868 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC28A2O43868 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.92■□□□□ 0.78
SLC28A2O43868 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SLC28A2O43868 GCSHP5-201ENST00000443090 522 ntBASIC19.92■□□□□ 0.78
SLC28A2O43868 AL158047.1-201ENST00000445918 881 ntBASIC19.92■□□□□ 0.78
SLC28A2O43868 AL034346.1-201ENST00000568244 1277 ntBASIC19.92■□□□□ 0.78
SLC28A2O43868 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.92■□□□□ 0.78
SLC28A2O43868 MIR4758-201ENST00000577688 71 ntBASIC19.92■□□□□ 0.78
SLC28A2O43868 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
SLC28A2O43868 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.92■□□□□ 0.78
SLC28A2O43868 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
SLC28A2O43868 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC28A2O43868 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC28A2O43868 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC28A2O43868 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SLC28A2O43868 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SLC28A2O43868 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC28A2O43868 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SLC28A2O43868 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.91■□□□□ 0.78
SLC28A2O43868 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.91■□□□□ 0.78
SLC28A2O43868 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.91■□□□□ 0.78
SLC28A2O43868 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SLC28A2O43868 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SLC28A2O43868 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SLC28A2O43868 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SLC28A2O43868 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SLC28A2O43868 MIR1224-201ENST00000408193 85 ntBASIC19.91■□□□□ 0.78
SLC28A2O43868 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.91■□□□□ 0.78
SLC28A2O43868 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SLC28A2O43868 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SLC28A2O43868 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.91■□□□□ 0.78
SLC28A2O43868 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SLC28A2O43868 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SLC28A2O43868 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.91■□□□□ 0.78
SLC28A2O43868 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SLC28A2O43868 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SLC28A2O43868 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SLC28A2O43868 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.91■□□□□ 0.78
SLC28A2O43868 AP004607.7-201ENST00000527152 1677 ntBASIC19.91■□□□□ 0.78
SLC28A2O43868 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SLC28A2O43868 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
SLC28A2O43868 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC28A2O43868 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC28A2O43868 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
SLC28A2O43868 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC28A2O43868 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SLC28A2O43868 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.9■□□□□ 0.78
SLC28A2O43868 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.9■□□□□ 0.78
SLC28A2O43868 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
SLC28A2O43868 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SLC28A2O43868 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.9■□□□□ 0.78
SLC28A2O43868 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.9■□□□□ 0.78
SLC28A2O43868 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.9■□□□□ 0.78
SLC28A2O43868 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.9■□□□□ 0.78
SLC28A2O43868 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.9■□□□□ 0.78
SLC28A2O43868 SLC7A5P1-201ENST00000568957 537 ntBASIC19.9■□□□□ 0.78
SLC28A2O43868 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SLC28A2O43868 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC28A2O43868 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC28A2O43868 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
SLC28A2O43868 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.9■□□□□ 0.78
SLC28A2O43868 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.9■□□□□ 0.78
SLC28A2O43868 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC28A2O43868 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC28A2O43868 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
SLC28A2O43868 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SLC28A2O43868 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SLC28A2O43868 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
SLC28A2O43868 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SLC28A2O43868 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SLC28A2O43868 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.89■□□□□ 0.77
SLC28A2O43868 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.89■□□□□ 0.77
SLC28A2O43868 AL024507.2-201ENST00000606070 2574 ntBASIC19.89■□□□□ 0.77
SLC28A2O43868 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SLC28A2O43868 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.88■□□□□ 0.77
SLC28A2O43868 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SLC28A2O43868 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SLC28A2O43868 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.88■□□□□ 0.77
SLC28A2O43868 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SLC28A2O43868 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SLC28A2O43868 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SLC28A2O43868 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SLC28A2O43868 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SLC28A2O43868 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SLC28A2O43868 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SLC28A2O43868 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.88■□□□□ 0.77
SLC28A2O43868 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.88■□□□□ 0.77
SLC28A2O43868 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.88■□□□□ 0.77
SLC28A2O43868 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.88■□□□□ 0.77
SLC28A2O43868 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SLC28A2O43868 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SLC28A2O43868 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SLC28A2O43868 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.88■□□□□ 0.77
SLC28A2O43868 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SLC28A2O43868 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms