Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.27■□□□□ 0.52
SGCEO43556 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SGCEO43556 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
SGCEO43556 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SGCEO43556 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
SGCEO43556 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SGCEO43556 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
SGCEO43556 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SGCEO43556 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SGCEO43556 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SGCEO43556 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
SGCEO43556 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SGCEO43556 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SGCEO43556 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.26■□□□□ 0.51
SGCEO43556 AC010141.2-201ENST00000452426 721 ntBASIC18.26■□□□□ 0.51
SGCEO43556 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SGCEO43556 DUX4L2-201ENST00000561772 1275 ntBASIC18.26■□□□□ 0.51
SGCEO43556 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.26■□□□□ 0.51
SGCEO43556 AC120498.10-201ENST00000621827 505 ntBASIC18.26■□□□□ 0.51
SGCEO43556 DUX4L6-201ENST00000626483 1275 ntBASIC18.26■□□□□ 0.51
SGCEO43556 DUX4L1-201ENST00000627662 1275 ntBASIC18.26■□□□□ 0.51
SGCEO43556 DUX4L8-201ENST00000629013 1275 ntBASIC18.26■□□□□ 0.51
SGCEO43556 DUX4L3-201ENST00000630187 1275 ntBASIC18.26■□□□□ 0.51
SGCEO43556 DUX4L7-201ENST00000630678 1275 ntBASIC18.26■□□□□ 0.51
SGCEO43556 DUX4L5-201ENST00000630834 1275 ntBASIC18.26■□□□□ 0.51
SGCEO43556 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SGCEO43556 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SGCEO43556 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SGCEO43556 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.26■□□□□ 0.51
SGCEO43556 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
SGCEO43556 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SGCEO43556 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SGCEO43556 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.25■□□□□ 0.51
SGCEO43556 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
SGCEO43556 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.25■□□□□ 0.51
SGCEO43556 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SGCEO43556 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SGCEO43556 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
SGCEO43556 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
SGCEO43556 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SGCEO43556 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SGCEO43556 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SGCEO43556 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SGCEO43556 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.25■□□□□ 0.51
SGCEO43556 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.25■□□□□ 0.51
SGCEO43556 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.25■□□□□ 0.51
SGCEO43556 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.25■□□□□ 0.51
SGCEO43556 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SGCEO43556 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
SGCEO43556 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SGCEO43556 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SGCEO43556 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.25■□□□□ 0.51
SGCEO43556 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
SGCEO43556 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SGCEO43556 AC004854.2-201ENST00000608450 1441 ntBASIC18.24■□□□□ 0.51
SGCEO43556 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SGCEO43556 AC073130.3-201ENST00000624389 2278 ntBASIC18.24■□□□□ 0.51
SGCEO43556 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
SGCEO43556 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SGCEO43556 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
SGCEO43556 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.24■□□□□ 0.51
SGCEO43556 AP001160.3-201ENST00000601484 763 ntBASIC18.24■□□□□ 0.51
SGCEO43556 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
SGCEO43556 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SGCEO43556 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SGCEO43556 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.24■□□□□ 0.51
SGCEO43556 AC019069.1-201ENST00000610008 1333 ntBASIC18.23■□□□□ 0.51
SGCEO43556 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SGCEO43556 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SGCEO43556 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SGCEO43556 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SGCEO43556 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SGCEO43556 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SGCEO43556 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
SGCEO43556 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SGCEO43556 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SGCEO43556 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SGCEO43556 AC097381.1-201ENST00000429019 1296 ntBASIC18.23■□□□□ 0.51
SGCEO43556 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SGCEO43556 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.23■□□□□ 0.51
SGCEO43556 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.23■□□□□ 0.51
SGCEO43556 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.23■□□□□ 0.51
SGCEO43556 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.23■□□□□ 0.51
SGCEO43556 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SGCEO43556 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SGCEO43556 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.23■□□□□ 0.51
SGCEO43556 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SGCEO43556 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
SGCEO43556 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.22■□□□□ 0.51
SGCEO43556 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SGCEO43556 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.22■□□□□ 0.51
SGCEO43556 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SGCEO43556 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
SGCEO43556 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SGCEO43556 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
SGCEO43556 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.22■□□□□ 0.51
SGCEO43556 AC034268.1-201ENST00000441047 882 ntBASIC18.22■□□□□ 0.51
SGCEO43556 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.22■□□□□ 0.51
SGCEO43556 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.22■□□□□ 0.51
SGCEO43556 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms