Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TO15178 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.12■□□□□ 0.65
TO15178 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TO15178 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TO15178 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.12■□□□□ 0.65
TO15178 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.12■□□□□ 0.65
TO15178 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.12■□□□□ 0.65
TO15178 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.12■□□□□ 0.65
TO15178 AC073111.5-205ENST00000641717 521 ntBASIC19.12■□□□□ 0.65
TO15178 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
TO15178 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TO15178 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.11■□□□□ 0.65
TO15178 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TO15178 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.11■□□□□ 0.65
TO15178 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TO15178 CDCA4P2-201ENST00000441182 718 ntBASIC19.11■□□□□ 0.65
TO15178 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TO15178 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.11■□□□□ 0.65
TO15178 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.11■□□□□ 0.65
TO15178 AL591742.1-201ENST00000604433 565 ntBASIC19.11■□□□□ 0.65
TO15178 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TO15178 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TO15178 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
TO15178 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TO15178 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.11■□□□□ 0.65
TO15178 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.11■□□□□ 0.65
TO15178 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
TO15178 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TO15178 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TO15178 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.1■□□□□ 0.65
TO15178 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
TO15178 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TO15178 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.1■□□□□ 0.65
TO15178 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.1■□□□□ 0.65
TO15178 AC007322.1-201ENST00000426983 750 ntBASIC19.1■□□□□ 0.65
TO15178 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TO15178 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TO15178 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.1■□□□□ 0.65
TO15178 RAP2CP1-201ENST00000605103 478 ntBASIC19.1■□□□□ 0.65
TO15178 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.1■□□□□ 0.65
TO15178 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
TO15178 AF106564.1-201ENST00000607058 2553 ntBASIC19.1■□□□□ 0.65
TO15178 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TO15178 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
TO15178 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TO15178 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TO15178 AC116050.2-201ENST00000612102 1779 ntBASIC19.09■□□□□ 0.65
TO15178 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.09■□□□□ 0.65
TO15178 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TO15178 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TO15178 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TO15178 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
TO15178 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
TO15178 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TO15178 CDV3P1-201ENST00000471403 739 ntBASIC19.09■□□□□ 0.65
TO15178 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.09■□□□□ 0.65
TO15178 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.09■□□□□ 0.65
TO15178 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.09■□□□□ 0.65
TO15178 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.09■□□□□ 0.65
TO15178 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.09■□□□□ 0.65
TO15178 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
TO15178 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
TO15178 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TO15178 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TO15178 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TO15178 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
TO15178 AC068338.2-201ENST00000563278 1430 ntBASIC19.08■□□□□ 0.65
TO15178 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TO15178 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
TO15178 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TO15178 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.08■□□□□ 0.65
TO15178 AC011484.1-201ENST00000377652 1995 ntBASIC19.08■□□□□ 0.65
TO15178 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
TO15178 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
TO15178 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
TO15178 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
TO15178 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
TO15178 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
TO15178 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
TO15178 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
TO15178 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.08■□□□□ 0.64
TO15178 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TO15178 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.08■□□□□ 0.64
TO15178 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TO15178 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TO15178 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
TO15178 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TO15178 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.08■□□□□ 0.64
TO15178 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TO15178 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
TO15178 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TO15178 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.07■□□□□ 0.64
TO15178 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.07■□□□□ 0.64
TO15178 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TO15178 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TO15178 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TO15178 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
TO15178 AC007322.3-201ENST00000426526 701 ntBASIC19.07■□□□□ 0.64
TO15178 AC026185.1-201ENST00000445748 174 ntBASIC19.07■□□□□ 0.64
TO15178 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms