Protein–RNA interactions for Protein: O14545

TRAFD1, TRAF-type zinc finger domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1O14545 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRAFD1O14545 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRAFD1O14545 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRAFD1O14545 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
TRAFD1O14545 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TRAFD1O14545 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRAFD1O14545 AC016769.1-201ENST00000409132 1010 ntBASIC21.22■□□□□ 0.99
TRAFD1O14545 POU5F1P4-201ENST00000413175 1085 ntBASIC21.22■□□□□ 0.99
TRAFD1O14545 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
TRAFD1O14545 KRT18P11-201ENST00000435214 1283 ntBASIC21.22■□□□□ 0.99
TRAFD1O14545 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.22■□□□□ 0.99
TRAFD1O14545 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.22■□□□□ 0.99
TRAFD1O14545 SLC7A5P2-201ENST00000553010 536 ntBASIC21.22■□□□□ 0.99
TRAFD1O14545 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.22■□□□□ 0.99
TRAFD1O14545 AC008175.2-201ENST00000612840 297 ntBASIC21.22■□□□□ 0.99
TRAFD1O14545 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.22■□□□□ 0.99
TRAFD1O14545 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.22■□□□□ 0.99
TRAFD1O14545 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.22■□□□□ 0.99
TRAFD1O14545 FEM1AP4-201ENST00000443167 1987 ntBASIC21.22■□□□□ 0.99
TRAFD1O14545 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.22■□□□□ 0.99
TRAFD1O14545 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
TRAFD1O14545 AC061975.6-201ENST00000579045 1553 ntBASIC21.22■□□□□ 0.99
TRAFD1O14545 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRAFD1O14545 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRAFD1O14545 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRAFD1O14545 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.21■□□□□ 0.99
TRAFD1O14545 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRAFD1O14545 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.21■□□□□ 0.99
TRAFD1O14545 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TRAFD1O14545 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRAFD1O14545 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRAFD1O14545 AC004911.1-201ENST00000416316 871 ntBASIC21.21■□□□□ 0.99
TRAFD1O14545 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.21■□□□□ 0.99
TRAFD1O14545 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.21■□□□□ 0.99
TRAFD1O14545 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.21■□□□□ 0.99
TRAFD1O14545 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.21■□□□□ 0.99
TRAFD1O14545 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TRAFD1O14545 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.21■□□□□ 0.99
TRAFD1O14545 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
TRAFD1O14545 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRAFD1O14545 Z98882.1-201ENST00000622160 2253 ntBASIC21.21■□□□□ 0.99
TRAFD1O14545 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.21■□□□□ 0.99
TRAFD1O14545 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.21■□□□□ 0.99
TRAFD1O14545 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TRAFD1O14545 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.99
TRAFD1O14545 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
TRAFD1O14545 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
TRAFD1O14545 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
TRAFD1O14545 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.2■□□□□ 0.98
TRAFD1O14545 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.2■□□□□ 0.98
TRAFD1O14545 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRAFD1O14545 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRAFD1O14545 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.2■□□□□ 0.98
TRAFD1O14545 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21.2■□□□□ 0.98
TRAFD1O14545 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.2■□□□□ 0.98
TRAFD1O14545 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRAFD1O14545 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
TRAFD1O14545 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRAFD1O14545 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRAFD1O14545 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRAFD1O14545 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRAFD1O14545 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRAFD1O14545 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.19■□□□□ 0.98
TRAFD1O14545 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRAFD1O14545 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.19■□□□□ 0.98
TRAFD1O14545 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.19■□□□□ 0.98
TRAFD1O14545 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
TRAFD1O14545 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.19■□□□□ 0.98
TRAFD1O14545 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.19■□□□□ 0.98
TRAFD1O14545 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TRAFD1O14545 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.19■□□□□ 0.98
TRAFD1O14545 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TRAFD1O14545 SLC7A5P1-201ENST00000568957 537 ntBASIC21.19■□□□□ 0.98
TRAFD1O14545 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TRAFD1O14545 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TRAFD1O14545 MYCNOS-205ENST00000641950 531 ntBASIC21.19■□□□□ 0.98
TRAFD1O14545 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRAFD1O14545 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRAFD1O14545 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRAFD1O14545 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRAFD1O14545 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.19■□□□□ 0.98
TRAFD1O14545 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRAFD1O14545 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.19■□□□□ 0.98
TRAFD1O14545 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
TRAFD1O14545 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRAFD1O14545 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRAFD1O14545 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRAFD1O14545 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.18■□□□□ 0.98
TRAFD1O14545 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TRAFD1O14545 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRAFD1O14545 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
TRAFD1O14545 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.18■□□□□ 0.98
TRAFD1O14545 AC007952.6-201ENST00000573168 2673 ntBASIC21.18■□□□□ 0.98
TRAFD1O14545 AC003957.1-201ENST00000625108 2673 ntBASIC21.18■□□□□ 0.98
TRAFD1O14545 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRAFD1O14545 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TRAFD1O14545 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRAFD1O14545 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
TRAFD1O14545 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
TRAFD1O14545 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms