Protein–RNA interactions for Protein: O00241

SIRPB1, Signal-regulatory protein beta-1, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1O00241 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SIRPB1O00241 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC17.49■□□□□ 0.39
SIRPB1O00241 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SIRPB1O00241 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SIRPB1O00241 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SIRPB1O00241 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.49■□□□□ 0.39
SIRPB1O00241 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.49■□□□□ 0.39
SIRPB1O00241 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SIRPB1O00241 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SIRPB1O00241 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
SIRPB1O00241 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SIRPB1O00241 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.48■□□□□ 0.39
SIRPB1O00241 PLK5-205ENST00000642079 1969 ntBASIC17.48■□□□□ 0.39
SIRPB1O00241 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SIRPB1O00241 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC17.48■□□□□ 0.39
SIRPB1O00241 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
SIRPB1O00241 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SIRPB1O00241 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SIRPB1O00241 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC17.48■□□□□ 0.39
SIRPB1O00241 GUK1-205ENST00000366722 850 ntTSL 3 BASIC17.48■□□□□ 0.39
SIRPB1O00241 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
SIRPB1O00241 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SIRPB1O00241 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC17.48■□□□□ 0.39
SIRPB1O00241 YBX1P1-201ENST00000445822 960 ntBASIC17.48■□□□□ 0.39
SIRPB1O00241 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC17.48■□□□□ 0.39
SIRPB1O00241 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC17.48■□□□□ 0.39
SIRPB1O00241 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC17.48■□□□□ 0.39
SIRPB1O00241 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
SIRPB1O00241 AL157384.1-201ENST00000445995 2473 ntBASIC17.48■□□□□ 0.39
SIRPB1O00241 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
SIRPB1O00241 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SIRPB1O00241 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SIRPB1O00241 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SIRPB1O00241 AC121338.2-201ENST00000622535 1744 ntBASIC17.47■□□□□ 0.39
SIRPB1O00241 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
SIRPB1O00241 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
SIRPB1O00241 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SIRPB1O00241 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SIRPB1O00241 AC123595.1-201ENST00000440769 1046 ntBASIC17.47■□□□□ 0.39
SIRPB1O00241 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SIRPB1O00241 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC17.47■□□□□ 0.39
SIRPB1O00241 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC17.47■□□□□ 0.39
SIRPB1O00241 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SIRPB1O00241 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SIRPB1O00241 AC006128.1-201ENST00000624704 1661 ntBASIC17.47■□□□□ 0.39
SIRPB1O00241 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SIRPB1O00241 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
SIRPB1O00241 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SIRPB1O00241 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SIRPB1O00241 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SIRPB1O00241 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SIRPB1O00241 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SIRPB1O00241 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
SIRPB1O00241 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC17.47■□□□□ 0.39
SIRPB1O00241 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
SIRPB1O00241 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SIRPB1O00241 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SIRPB1O00241 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC17.46■□□□□ 0.39
SIRPB1O00241 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SIRPB1O00241 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SIRPB1O00241 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
SIRPB1O00241 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SIRPB1O00241 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SIRPB1O00241 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
SIRPB1O00241 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC17.46■□□□□ 0.39
SIRPB1O00241 POU5F1P4-201ENST00000413175 1085 ntBASIC17.46■□□□□ 0.39
SIRPB1O00241 AC104187.1-201ENST00000607510 612 ntBASIC17.46■□□□□ 0.39
SIRPB1O00241 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
SIRPB1O00241 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SIRPB1O00241 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SIRPB1O00241 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC17.46■□□□□ 0.38
SIRPB1O00241 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
SIRPB1O00241 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
SIRPB1O00241 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
SIRPB1O00241 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC17.46■□□□□ 0.38
SIRPB1O00241 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SIRPB1O00241 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SIRPB1O00241 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.45■□□□□ 0.38
SIRPB1O00241 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.45■□□□□ 0.38
SIRPB1O00241 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SIRPB1O00241 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SIRPB1O00241 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SIRPB1O00241 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SIRPB1O00241 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC17.45■□□□□ 0.38
SIRPB1O00241 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC17.45■□□□□ 0.38
SIRPB1O00241 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.45■□□□□ 0.38
SIRPB1O00241 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.45■□□□□ 0.38
SIRPB1O00241 AC138907.5-202ENST00000569484 235 ntBASIC17.45■□□□□ 0.38
SIRPB1O00241 CCDC92B-201ENST00000575506 885 ntBASIC17.45■□□□□ 0.38
SIRPB1O00241 RAB43-208ENST00000615093 783 ntTSL 5 BASIC17.45■□□□□ 0.38
SIRPB1O00241 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SIRPB1O00241 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SIRPB1O00241 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SIRPB1O00241 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SIRPB1O00241 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SIRPB1O00241 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
SIRPB1O00241 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SIRPB1O00241 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.45■□□□□ 0.38
SIRPB1O00241 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SIRPB1O00241 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms