Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 AC007322.3-201ENST00000426526 701 ntBASIC17.24■□□□□ 0.35
RNF223E7ERA6 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.24■□□□□ 0.35
RNF223E7ERA6 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RNF223E7ERA6 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
RNF223E7ERA6 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.24■□□□□ 0.35
RNF223E7ERA6 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RNF223E7ERA6 AC009446.1-201ENST00000519840 808 ntTSL 2 BASIC17.24■□□□□ 0.35
RNF223E7ERA6 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
RNF223E7ERA6 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.24■□□□□ 0.35
RNF223E7ERA6 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RNF223E7ERA6 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RNF223E7ERA6 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF223E7ERA6 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC17.24■□□□□ 0.35
RNF223E7ERA6 AC092053.2-201ENST00000640557 1818 ntBASIC17.24■□□□□ 0.35
RNF223E7ERA6 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RNF223E7ERA6 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.23■□□□□ 0.35
RNF223E7ERA6 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF223E7ERA6 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RNF223E7ERA6 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF223E7ERA6 FAM210CP-201ENST00000445714 574 ntBASIC17.23■□□□□ 0.35
RNF223E7ERA6 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
RNF223E7ERA6 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RNF223E7ERA6 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.23■□□□□ 0.35
RNF223E7ERA6 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.23■□□□□ 0.35
RNF223E7ERA6 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF223E7ERA6 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF223E7ERA6 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
RNF223E7ERA6 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RNF223E7ERA6 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF223E7ERA6 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC17.23■□□□□ 0.35
RNF223E7ERA6 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC17.23■□□□□ 0.35
RNF223E7ERA6 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RNF223E7ERA6 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF223E7ERA6 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF223E7ERA6 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.22■□□□□ 0.35
RNF223E7ERA6 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RNF223E7ERA6 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RNF223E7ERA6 POM121L13P-201ENST00000422362 380 ntBASIC17.22■□□□□ 0.35
RNF223E7ERA6 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.22■□□□□ 0.35
RNF223E7ERA6 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RNF223E7ERA6 AP001002.2-201ENST00000625137 386 ntBASIC17.22■□□□□ 0.35
RNF223E7ERA6 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.22■□□□□ 0.35
RNF223E7ERA6 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF223E7ERA6 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.22■□□□□ 0.35
RNF223E7ERA6 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF223E7ERA6 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF223E7ERA6 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
RNF223E7ERA6 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF223E7ERA6 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF223E7ERA6 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
RNF223E7ERA6 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RNF223E7ERA6 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RNF223E7ERA6 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC17.21■□□□□ 0.35
RNF223E7ERA6 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF223E7ERA6 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF223E7ERA6 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RNF223E7ERA6 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF223E7ERA6 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
RNF223E7ERA6 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.21■□□□□ 0.35
RNF223E7ERA6 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.21■□□□□ 0.35
RNF223E7ERA6 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RNF223E7ERA6 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF223E7ERA6 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
RNF223E7ERA6 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.21■□□□□ 0.35
RNF223E7ERA6 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.21■□□□□ 0.35
RNF223E7ERA6 LINC01023-201ENST00000606054 436 ntBASIC17.21■□□□□ 0.35
RNF223E7ERA6 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF223E7ERA6 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RNF223E7ERA6 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
RNF223E7ERA6 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.21■□□□□ 0.34
RNF223E7ERA6 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC17.2■□□□□ 0.34
RNF223E7ERA6 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
RNF223E7ERA6 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC17.2■□□□□ 0.34
RNF223E7ERA6 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC17.2■□□□□ 0.34
RNF223E7ERA6 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF223E7ERA6 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF223E7ERA6 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF223E7ERA6 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF223E7ERA6 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.2■□□□□ 0.34
RNF223E7ERA6 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.2■□□□□ 0.34
RNF223E7ERA6 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RNF223E7ERA6 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.2■□□□□ 0.34
RNF223E7ERA6 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RNF223E7ERA6 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
RNF223E7ERA6 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
RNF223E7ERA6 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.2■□□□□ 0.34
RNF223E7ERA6 NFE2L3P1-201ENST00000588207 1959 ntBASIC17.2■□□□□ 0.34
RNF223E7ERA6 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF223E7ERA6 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RNF223E7ERA6 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC17.2■□□□□ 0.34
RNF223E7ERA6 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
RNF223E7ERA6 AC026471.6-201ENST00000622954 1905 ntBASIC17.19■□□□□ 0.34
RNF223E7ERA6 CYP21A1P-202ENST00000354927 1481 ntBASIC17.19■□□□□ 0.34
RNF223E7ERA6 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RNF223E7ERA6 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RNF223E7ERA6 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF223E7ERA6 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RNF223E7ERA6 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RNF223E7ERA6 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF223E7ERA6 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms