Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC23.18■■□□□ 1.3
SPDYE4A6NLX3 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SPDYE4A6NLX3 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SPDYE4A6NLX3 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SPDYE4A6NLX3 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SPDYE4A6NLX3 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
SPDYE4A6NLX3 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC23.17■■□□□ 1.3
SPDYE4A6NLX3 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC23.17■■□□□ 1.3
SPDYE4A6NLX3 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
SPDYE4A6NLX3 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SPDYE4A6NLX3 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SPDYE4A6NLX3 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SPDYE4A6NLX3 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
SPDYE4A6NLX3 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC23.17■■□□□ 1.3
SPDYE4A6NLX3 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SPDYE4A6NLX3 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SPDYE4A6NLX3 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SPDYE4A6NLX3 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC23.17■■□□□ 1.3
SPDYE4A6NLX3 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
SPDYE4A6NLX3 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC23.17■■□□□ 1.3
SPDYE4A6NLX3 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC23.17■■□□□ 1.3
SPDYE4A6NLX3 BX547991.1-201ENST00000582543 1206 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SPDYE4A6NLX3 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC23.17■■□□□ 1.3
SPDYE4A6NLX3 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC23.17■■□□□ 1.3
SPDYE4A6NLX3 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
SPDYE4A6NLX3 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SPDYE4A6NLX3 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
SPDYE4A6NLX3 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SPDYE4A6NLX3 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
SPDYE4A6NLX3 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SPDYE4A6NLX3 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
SPDYE4A6NLX3 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SPDYE4A6NLX3 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SPDYE4A6NLX3 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC23.16■■□□□ 1.3
SPDYE4A6NLX3 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC23.16■■□□□ 1.3
SPDYE4A6NLX3 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SPDYE4A6NLX3 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
SPDYE4A6NLX3 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SPDYE4A6NLX3 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC23.16■■□□□ 1.3
SPDYE4A6NLX3 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC23.16■■□□□ 1.3
SPDYE4A6NLX3 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC23.16■■□□□ 1.3
SPDYE4A6NLX3 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC23.16■■□□□ 1.3
SPDYE4A6NLX3 TESC-206ENST00000541210 936 ntTSL 3 BASIC23.16■■□□□ 1.3
SPDYE4A6NLX3 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SPDYE4A6NLX3 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SPDYE4A6NLX3 EI24-211ENST00000534546 1544 ntTSL 2 BASIC23.16■■□□□ 1.3
SPDYE4A6NLX3 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SPDYE4A6NLX3 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SPDYE4A6NLX3 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SPDYE4A6NLX3 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC23.16■■□□□ 1.3
SPDYE4A6NLX3 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC23.15■■□□□ 1.3
SPDYE4A6NLX3 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
SPDYE4A6NLX3 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
SPDYE4A6NLX3 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC23.15■■□□□ 1.3
SPDYE4A6NLX3 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SPDYE4A6NLX3 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SPDYE4A6NLX3 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SPDYE4A6NLX3 CDCA4P2-201ENST00000441182 718 ntBASIC23.15■■□□□ 1.3
SPDYE4A6NLX3 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SPDYE4A6NLX3 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC23.15■■□□□ 1.3
SPDYE4A6NLX3 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC23.15■■□□□ 1.3
SPDYE4A6NLX3 KRT18P61-201ENST00000585825 1298 ntBASIC23.15■■□□□ 1.3
SPDYE4A6NLX3 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SPDYE4A6NLX3 AP004607.4-201ENST00000530158 1459 ntBASIC23.15■■□□□ 1.3
SPDYE4A6NLX3 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SPDYE4A6NLX3 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC23.15■■□□□ 1.3
SPDYE4A6NLX3 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
SPDYE4A6NLX3 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
SPDYE4A6NLX3 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SPDYE4A6NLX3 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
SPDYE4A6NLX3 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC23.15■■□□□ 1.3
SPDYE4A6NLX3 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC23.15■■□□□ 1.3
SPDYE4A6NLX3 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SPDYE4A6NLX3 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC23.14■■□□□ 1.3
SPDYE4A6NLX3 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.3
SPDYE4A6NLX3 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC23.14■■□□□ 1.29
SPDYE4A6NLX3 AC010141.3-201ENST00000456659 717 ntBASIC23.14■■□□□ 1.29
SPDYE4A6NLX3 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC23.14■■□□□ 1.29
SPDYE4A6NLX3 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC23.14■■□□□ 1.29
SPDYE4A6NLX3 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
SPDYE4A6NLX3 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC23.14■■□□□ 1.29
SPDYE4A6NLX3 AC006213.4-201ENST00000616184 634 ntBASIC23.14■■□□□ 1.29
SPDYE4A6NLX3 AC005786.4-201ENST00000623369 682 ntBASIC23.14■■□□□ 1.29
SPDYE4A6NLX3 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC23.14■■□□□ 1.29
SPDYE4A6NLX3 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SPDYE4A6NLX3 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
SPDYE4A6NLX3 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
SPDYE4A6NLX3 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC23.14■■□□□ 1.29
SPDYE4A6NLX3 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SPDYE4A6NLX3 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
SPDYE4A6NLX3 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SPDYE4A6NLX3 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SPDYE4A6NLX3 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC23.13■■□□□ 1.29
SPDYE4A6NLX3 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
SPDYE4A6NLX3 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC23.13■■□□□ 1.29
SPDYE4A6NLX3 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC23.13■■□□□ 1.29
SPDYE4A6NLX3 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC23.13■■□□□ 1.29
SPDYE4A6NLX3 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
SPDYE4A6NLX3 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SPDYE4A6NLX3 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC23.13■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms