Protein–RNA interactions for Protein: A0A087X179

TBC1D3E, TBC1 domain family member 3E, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3EA0A087X179 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TBC1D3EA0A087X179 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TBC1D3EA0A087X179 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TBC1D3EA0A087X179 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TBC1D3EA0A087X179 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
TBC1D3EA0A087X179 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TBC1D3EA0A087X179 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TBC1D3EA0A087X179 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TBC1D3EA0A087X179 MCRIP2P1-201ENST00000394346 511 ntBASIC20.69■□□□□ 0.9
TBC1D3EA0A087X179 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.69■□□□□ 0.9
TBC1D3EA0A087X179 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.69■□□□□ 0.9
TBC1D3EA0A087X179 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TBC1D3EA0A087X179 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.69■□□□□ 0.9
TBC1D3EA0A087X179 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.69■□□□□ 0.9
TBC1D3EA0A087X179 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TBC1D3EA0A087X179 ITM2C-210ENST00000620962 501 ntBASIC20.69■□□□□ 0.9
TBC1D3EA0A087X179 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TBC1D3EA0A087X179 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TBC1D3EA0A087X179 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TBC1D3EA0A087X179 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TBC1D3EA0A087X179 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TBC1D3EA0A087X179 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.69■□□□□ 0.9
TBC1D3EA0A087X179 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TBC1D3EA0A087X179 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TBC1D3EA0A087X179 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TBC1D3EA0A087X179 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TBC1D3EA0A087X179 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.68■□□□□ 0.9
TBC1D3EA0A087X179 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.68■□□□□ 0.9
TBC1D3EA0A087X179 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.68■□□□□ 0.9
TBC1D3EA0A087X179 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TBC1D3EA0A087X179 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.68■□□□□ 0.9
TBC1D3EA0A087X179 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.68■□□□□ 0.9
TBC1D3EA0A087X179 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.68■□□□□ 0.9
TBC1D3EA0A087X179 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
TBC1D3EA0A087X179 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.68■□□□□ 0.9
TBC1D3EA0A087X179 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
TBC1D3EA0A087X179 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.68■□□□□ 0.9
TBC1D3EA0A087X179 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.68■□□□□ 0.9
TBC1D3EA0A087X179 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
TBC1D3EA0A087X179 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TBC1D3EA0A087X179 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TBC1D3EA0A087X179 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TBC1D3EA0A087X179 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.68■□□□□ 0.9
TBC1D3EA0A087X179 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TBC1D3EA0A087X179 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TBC1D3EA0A087X179 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TBC1D3EA0A087X179 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TBC1D3EA0A087X179 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
TBC1D3EA0A087X179 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TBC1D3EA0A087X179 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TBC1D3EA0A087X179 ESRRAP1-201ENST00000400596 1257 ntBASIC20.67■□□□□ 0.9
TBC1D3EA0A087X179 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
TBC1D3EA0A087X179 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.67■□□□□ 0.9
TBC1D3EA0A087X179 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.67■□□□□ 0.9
TBC1D3EA0A087X179 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
TBC1D3EA0A087X179 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
TBC1D3EA0A087X179 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.67■□□□□ 0.9
TBC1D3EA0A087X179 AL589743.5-201ENST00000616611 1050 ntBASIC20.67■□□□□ 0.9
TBC1D3EA0A087X179 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.67■□□□□ 0.9
TBC1D3EA0A087X179 AC066615.1-201ENST00000640911 628 ntBASIC20.67■□□□□ 0.9
TBC1D3EA0A087X179 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
TBC1D3EA0A087X179 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TBC1D3EA0A087X179 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TBC1D3EA0A087X179 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TBC1D3EA0A087X179 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.67■□□□□ 0.9
TBC1D3EA0A087X179 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.67■□□□□ 0.9
TBC1D3EA0A087X179 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
TBC1D3EA0A087X179 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.66■□□□□ 0.9
TBC1D3EA0A087X179 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
TBC1D3EA0A087X179 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TBC1D3EA0A087X179 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
TBC1D3EA0A087X179 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TBC1D3EA0A087X179 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.66■□□□□ 0.9
TBC1D3EA0A087X179 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.66■□□□□ 0.9
TBC1D3EA0A087X179 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TBC1D3EA0A087X179 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TBC1D3EA0A087X179 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TBC1D3EA0A087X179 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TBC1D3EA0A087X179 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
TBC1D3EA0A087X179 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TBC1D3EA0A087X179 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TBC1D3EA0A087X179 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
TBC1D3EA0A087X179 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TBC1D3EA0A087X179 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TBC1D3EA0A087X179 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
TBC1D3EA0A087X179 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TBC1D3EA0A087X179 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TBC1D3EA0A087X179 AC116050.2-201ENST00000612102 1779 ntBASIC20.65■□□□□ 0.9
TBC1D3EA0A087X179 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TBC1D3EA0A087X179 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.65■□□□□ 0.9
TBC1D3EA0A087X179 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TBC1D3EA0A087X179 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TBC1D3EA0A087X179 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TBC1D3EA0A087X179 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TBC1D3EA0A087X179 KRT18P68-201ENST00000392293 1000 ntBASIC20.65■□□□□ 0.9
TBC1D3EA0A087X179 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.65■□□□□ 0.9
TBC1D3EA0A087X179 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.65■□□□□ 0.9
TBC1D3EA0A087X179 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
TBC1D3EA0A087X179 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.65■□□□□ 0.9
TBC1D3EA0A087X179 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms